RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 DAB1O75553 588 aa17.24■□□□□ 0.35
CXCL1-201ENST00000395761 IGLV3-25P01717 112 aa17.24■□□□□ 0.35
CXCL1-201ENST00000395761 IGLV3-27P01718 113 aa17.24■□□□□ 0.35
CXCL1-201ENST00000395761 PLEKP08567 350 aaPredicted RBP17.24■□□□□ 0.35
CXCL1-201ENST00000395761 TFE3P19532 575 aaPredicted RBP17.24■□□□□ 0.35
CXCL1-201ENST00000395761 SCNN1AP37088 669 aa17.24■□□□□ 0.35
CXCL1-201ENST00000395761 OPRD1P41143 372 aa17.24■□□□□ 0.35
CXCL1-201ENST00000395761 SLC6A11P48066 632 aa17.24■□□□□ 0.35
CXCL1-201ENST00000395761 HARS2P49590 506 aaKnown RBP17.24■□□□□ 0.35
CXCL1-201ENST00000395761 CDK17Q00537 523 aa17.24■□□□□ 0.35
CXCL1-201ENST00000395761 ARID5BQ14865 1188 aa17.24■□□□□ 0.35
CXCL1-201ENST00000395761 TPGS1Q6ZTW0 290 aa17.24■□□□□ 0.35
CXCL1-201ENST00000395761 DNAAF5Q86Y56 855 aa17.24■□□□□ 0.35
CXCL1-201ENST00000395761 SLC39A13Q96H72 371 aa17.24■□□□□ 0.35
CXCL1-201ENST00000395761 FCRL2Q96LA5 508 aaPredicted RBP17.24■□□□□ 0.35
CXCL1-201ENST00000395761 SERPINB11Q96P15 392 aa17.24■□□□□ 0.35
CXCL1-201ENST00000395761 NUCKS1Q9H1E3 243 aaKnown RBP17.24■□□□□ 0.35
CXCL1-201ENST00000395761 DLGAP2Q9P1A6 1054 aa17.24■□□□□ 0.35
CXCL1-201ENST00000395761 TMEM59LQ9UK28 342 aa17.24■□□□□ 0.35
CXCL1-201ENST00000395761 ZNF510Q9Y2H8 683 aa17.24■□□□□ 0.35
CXCL1-201ENST00000395761 SYNJ2BP-COX16A0A087WUM0 186 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 TMCO5BA8MYB1 307 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 TRDMT1O14717 391 aaKnown RBP17.23■□□□□ 0.35
CXCL1-201ENST00000395761 GJB6O95452 261 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 ADH1CP00326 375 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 ADH5P11766 374 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 NOS2P35228 1153 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 FLT3P36888 993 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 AMPD2Q01433 879 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 EIF4EBP2Q13542 120 aaPredicted RBP17.23■□□□□ 0.35
CXCL1-201ENST00000395761 ANO4Q32M45 955 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 ZC3H12AQ5D1E8 599 aaKnown RBP17.23■□□□□ 0.35
CXCL1-201ENST00000395761 ACAD10Q6JQN1 1059 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 FSTL4Q6MZW2 842 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 TRNP1Q6NT89 227 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 MON1BQ7L1V2 547 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 C12orf40Q86WS4 652 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 DRC7Q8IY82 874 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 NAT16Q8N8M0 369 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 P2RY13Q9BPV8 354 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 ADAM33Q9BZ11 813 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 OSBPL6Q9BZF3 934 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 FAM204AQ9H8W3 233 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 LMAN1LQ9HAT1 526 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 RBM12Q9NTZ6 932 aaKnown RBP17.23■□□□□ 0.35
CXCL1-201ENST00000395761 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.23■□□□□ 0.35
CXCL1-201ENST00000395761 COX16Q9P0S2 106 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 CALCOCO1Q9P1Z2 691 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 TLR6Q9Y2C9 796 aa17.23■□□□□ 0.35
CXCL1-201ENST00000395761 GOLGA6L7A0A1B0GV03 622 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 IRAK2O43187 625 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 TPM1P09493 284 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 CHRNB1P11230 501 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 MATKP42679 507 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 GAD2Q05329 585 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 RING1Q06587 406 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 C1QBPQ07021 282 aaKnown RBP17.22■□□□□ 0.35
CXCL1-201ENST00000395761 MESP2Q0VG99 397 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 NNTQ13423 1086 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 TMEM196Q5HYL7 178 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 OTUD1Q5VV17 481 aaPredicted RBP17.22■□□□□ 0.35
CXCL1-201ENST00000395761 NUGGCQ68CJ6 796 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 C1orf228Q6PIY5 440 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 UNC45BQ8IWX7 931 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 MCOLN2Q8IZK6 566 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 EMC1Q8N766 993 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 CD101Q93033 1021 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 BHMTQ93088 406 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 CLDN23Q96B33 292 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 METTL5Q9NRN9 209 aaKnown RBP17.22■□□□□ 0.35
CXCL1-201ENST00000395761 DDIT4Q9NX09 232 aa17.22■□□□□ 0.35
CXCL1-201ENST00000395761 BZW2Q9Y6E2 419 aaKnown RBP17.22■□□□□ 0.35
CXCL1-201ENST00000395761 MYOFQ9NZM1 2061 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 AKR1B15C9JRZ8 316 aaPredicted RBP17.21■□□□□ 0.35
CXCL1-201ENST00000395761 NEDD8-MDP1E9PL57 170 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 M0QYT0 321 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 HOXC11O43248 304 aaPredicted RBP17.21■□□□□ 0.35
CXCL1-201ENST00000395761 TSPAN3O60637 253 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 EGFP01133 1207 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 SERPING1P05155 500 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 CALB1P05937 261 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 HNRNPH3P31942 346 aaKnown RBP17.21■□□□□ 0.35
CXCL1-201ENST00000395761 TDRD12Q587J7 1177 aaKnown RBP17.21■□□□□ 0.35
CXCL1-201ENST00000395761 NADSYN1Q6IA69 706 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 WDR59Q6PJI9 974 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 CNGA4Q8IV77 575 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 FAM217AQ8IXS0 508 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 OR8K1Q8NGG5 319 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 JOSD2Q8TAC2 188 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 EZH1Q92800 747 aaPredicted RBP17.21■□□□□ 0.35
CXCL1-201ENST00000395761 NT5C3BQ969T7 300 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 NPY6RQ99463 290 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 BBS2Q9BXC9 721 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 PLK2Q9NYY3 685 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 MARK1Q9P0L2 795 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 ARHGAP20Q9P2F6 1191 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 WDR35Q9P2L0 1181 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 ADAMTS1Q9UHI8 967 aa17.21■□□□□ 0.35
CXCL1-201ENST00000395761 XPO7Q9UIA9 1087 aaKnown RBP17.21■□□□□ 0.35
CXCL1-201ENST00000395761 STOML2Q9UJZ1 356 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms