RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 CCDC105Q8IYK2 499 aa20.74■□□□□ 0.91
SNCA-203ENST00000394986 ZNF687Q8N1G0 1237 aa20.74■□□□□ 0.91
SNCA-203ENST00000394986 EMC1Q8N766 993 aa20.74■□□□□ 0.91
SNCA-203ENST00000394986 BHMTQ93088 406 aa20.74■□□□□ 0.91
SNCA-203ENST00000394986 DCLK3Q9C098 648 aa20.74■□□□□ 0.91
SNCA-203ENST00000394986 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.74■□□□□ 0.91
SNCA-203ENST00000394986 CALCOCO1Q9P1Z2 691 aa20.74■□□□□ 0.91
SNCA-203ENST00000394986 TRDMT1O14717 391 aaKnown RBP20.73■□□□□ 0.91
SNCA-203ENST00000394986 MFAP3LO75121 409 aa20.73■□□□□ 0.91
SNCA-203ENST00000394986 ADH1CP00326 375 aa20.73■□□□□ 0.91
SNCA-203ENST00000394986 CALB1P05937 261 aa20.73■□□□□ 0.91
SNCA-203ENST00000394986 SCNN1AP37088 669 aa20.73■□□□□ 0.91
SNCA-203ENST00000394986 MATKP42679 507 aa20.73■□□□□ 0.91
SNCA-203ENST00000394986 ADKP55263 362 aaKnown RBP20.73■□□□□ 0.91
SNCA-203ENST00000394986 ANO4Q32M45 955 aa20.73■□□□□ 0.91
SNCA-203ENST00000394986 MSANTD3Q96H12 275 aa20.73■□□□□ 0.91
SNCA-203ENST00000394986 SLC39A13Q96H72 371 aa20.73■□□□□ 0.91
SNCA-203ENST00000394986 ANP32EQ9BTT0 268 aa20.73■□□□□ 0.91
SNCA-203ENST00000394986 FBRSL1Q9HCM7 1045 aaKnown RBP20.73■□□□□ 0.91
SNCA-203ENST00000394986 DDIT4Q9NX09 232 aa20.73■□□□□ 0.91
SNCA-203ENST00000394986 ARHGAP20Q9P2F6 1191 aa20.73■□□□□ 0.91
SNCA-203ENST00000394986 TMEM59LQ9UK28 342 aa20.73■□□□□ 0.91
SNCA-203ENST00000394986 TLR6Q9Y2C9 796 aa20.73■□□□□ 0.91
SNCA-203ENST00000394986 SIT1Q9Y3P8 196 aa20.73■□□□□ 0.91
SNCA-203ENST00000394986 ZDBF2Q9HCK1 2354 aa20.73■□□□□ 0.91
SNCA-203ENST00000394986 ATMINO43313 823 aaPredicted RBP20.72■□□□□ 0.91
SNCA-203ENST00000394986 MOCS2O96007 188 aaPredicted RBP20.72■□□□□ 0.91
SNCA-203ENST00000394986 NOS2P35228 1153 aa20.72■□□□□ 0.91
SNCA-203ENST00000394986 OPRD1P41143 372 aa20.72■□□□□ 0.91
SNCA-203ENST00000394986 SLC6A11P48066 632 aa20.72■□□□□ 0.91
SNCA-203ENST00000394986 C1QBPQ07021 282 aaKnown RBP20.72■□□□□ 0.91
SNCA-203ENST00000394986 TBX2Q13207 712 aaPredicted RBP20.72■□□□□ 0.91
SNCA-203ENST00000394986 NME3Q13232 169 aa20.72■□□□□ 0.91
SNCA-203ENST00000394986 NNTQ13423 1086 aa20.72■□□□□ 0.91
SNCA-203ENST00000394986 ZC3H12AQ5D1E8 599 aaKnown RBP20.72■□□□□ 0.91
SNCA-203ENST00000394986 WDR59Q6PJI9 974 aa20.72■□□□□ 0.91
SNCA-203ENST00000394986 MCOLN2Q8IZK6 566 aa20.72■□□□□ 0.91
SNCA-203ENST00000394986 NAT16Q8N8M0 369 aa20.72■□□□□ 0.91
SNCA-203ENST00000394986 JOSD2Q8TAC2 188 aa20.72■□□□□ 0.91
SNCA-203ENST00000394986 DNAJC7Q99615 494 aa20.72■□□□□ 0.91
SNCA-203ENST00000394986 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.72■□□□□ 0.91
SNCA-203ENST00000394986 RBM12Q9NTZ6 932 aaKnown RBP20.72■□□□□ 0.91
SNCA-203ENST00000394986 XPO7Q9UIA9 1087 aaKnown RBP20.72■□□□□ 0.91
SNCA-203ENST00000394986 ZNF510Q9Y2H8 683 aa20.72■□□□□ 0.91
SNCA-203ENST00000394986 MRPS17Q9Y2R5 130 aaKnown RBP20.72■□□□□ 0.91
SNCA-203ENST00000394986 F5P12259 2224 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 GOLGA6L7A0A1B0GV03 622 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 NEDD8-MDP1E9PL57 170 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 M0QYT0 321 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 TPM1P09493 284 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 RRM1P23921 792 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 AVPR2P30518 371 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 SULT1E1P49888 294 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 GALK1P51570 392 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 CLCN5P51795 746 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 RING1Q06587 406 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 MESP2Q0VG99 397 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 EIF4EBP2Q13542 120 aaPredicted RBP20.71■□□□□ 0.91
SNCA-203ENST00000394986 NUGGCQ68CJ6 796 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 OR8K1Q8NGG5 319 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 CFAP57Q96MR6 1250 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 TBCBQ99426 244 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 NPY6RQ99463 290 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 BBS2Q9BXC9 721 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 ABHD10Q9NUJ1 306 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 PLK2Q9NYY3 685 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 ADAMTS1Q9UHI8 967 aa20.71■□□□□ 0.91
SNCA-203ENST00000394986 BZW2Q9Y6E2 419 aaKnown RBP20.71■□□□□ 0.91
SNCA-203ENST00000394986 HOXC11O43248 304 aaPredicted RBP20.7■□□□□ 0.9
SNCA-203ENST00000394986 TSPAN3O60637 253 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 HNRNPH3P31942 346 aaKnown RBP20.7■□□□□ 0.9
SNCA-203ENST00000394986 GSCP56915 257 aaPredicted RBP20.7■□□□□ 0.9
SNCA-203ENST00000394986 GAD2Q05329 585 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 FZD5Q13467 585 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 FSTL4Q6MZW2 842 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 DNAJC24Q6P3W2 148 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 UNC45BQ8IWX7 931 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 FAM217AQ8IXS0 508 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 CD101Q93033 1021 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 P2RY13Q9BPV8 354 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 WDR35Q9P2L0 1181 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 TCRBV5S1A1TA0A578 114 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 TRIM24O15164 1050 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 EGFP01133 1207 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 FTLP02792 175 aaPredicted RBP20.7■□□□□ 0.9
SNCA-203ENST00000394986 TYRP14679 529 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 ATXN1P54253 815 aaKnown RBP20.7■□□□□ 0.9
SNCA-203ENST00000394986 AMPD2Q01433 879 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 KDSRQ06136 332 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 ARID5BQ14865 1188 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 RAB6CQ53S08 254 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 FAM133BQ5BKY9 247 aaKnown RBP20.7■□□□□ 0.9
SNCA-203ENST00000394986 TMEM196Q5HYL7 178 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 NADSYN1Q6IA69 706 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 RFWD3Q6PCD5 774 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 C1orf228Q6PIY5 440 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 C3orf20Q8ND61 904 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 RXFP2Q8WXD0 754 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 RNF34Q969K3 372 aa20.7■□□□□ 0.9
SNCA-203ENST00000394986 NT5C3BQ969T7 300 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms