RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 TIGD7Q6NT04 549 aaPredicted RBP12.55□□□□□ -0.4
SIN3A-202ENST00000394947 RAD9BQ6WBX8 426 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 MAT2BQ9NZL9 334 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 O00370 1275 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 GLP2RO95838 553 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 ACAT1P24752 427 aaKnown RBP12.55□□□□□ -0.4
SIN3A-202ENST00000394947 CYP24A1Q07973 514 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 BIKQ13323 160 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 TAF2Q6P1X5 1199 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 FAM172AQ8WUF8 416 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 DPY30Q9C005 99 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 SLITRK2Q9H156 845 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 CCDC167Q9P0B6 97 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 WDR27A2RRH5 827 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 PHGDHO43175 533 aaKnown RBP12.55□□□□□ -0.4
SIN3A-202ENST00000394947 IFNA16P05015 189 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 ZNF286BP0CG31 522 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 MAGP20916 626 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 KLRC1P26715 233 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 GEMP55040 296 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 NAB2Q15742 525 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 PERM1Q5SV97 790 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 EID3Q8N140 333 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 FBXL21Q9UKT6 434 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 VAV3Q9UKW4 847 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 C17orf102A2RUQ5 167 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 ZNF839A8K0R7 811 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 PDXKO00764 312 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 ACSL4O60488 711 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 NOS1APO75052 506 aaPredicted RBP12.55□□□□□ -0.4
SIN3A-202ENST00000394947 ANXA9O76027 345 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 CCDC130P13994 396 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 SLC1A6P48664 564 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 POLD2P49005 469 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 NUP107P57740 925 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 RPTNQ6XPR3 784 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 LINC00523Q86TU6 105 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 MB21D2Q8IYB1 491 aaPredicted RBP12.55□□□□□ -0.4
SIN3A-202ENST00000394947 FBXO30Q8TB52 745 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 WDR60Q8WVS4 1066 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 CRYL1Q9Y2S2 319 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 PLOD3O60568 738 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 CELF2O95319 508 aaKnown RBP12.55□□□□□ -0.4
SIN3A-202ENST00000394947 RAG1P15918 1043 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 FMO4P31512 558 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 BCAP31P51572 246 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 TCEAL5Q5H9L2 206 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 STK32CQ86UX6 486 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 ZCCHC7Q8N3Z6 543 aaKnown RBP12.55□□□□□ -0.4
SIN3A-202ENST00000394947 PNMA5Q96PV4 448 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 ERP44Q9BS26 406 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 SOHLH2Q9NX45 425 aa12.55□□□□□ -0.4
SIN3A-202ENST00000394947 PRODHO43272 600 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 EXTL3O43909 919 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 LTKP29376 864 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 ACADSBP45954 432 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 SCTRP47872 440 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 PKNOX1P55347 436 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 GALNTL5Q7Z4T8 443 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 TTC39CQ8N584 583 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 MRPL48Q96GC5 212 aaKnown RBP12.54□□□□□ -0.4
SIN3A-202ENST00000394947 EXOC2Q96KP1 924 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 TMEM39BQ9GZU3 492 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 SNX6Q9UNH7 406 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 LRCH1Q9Y2L9 728 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 JCHAINP01591 159 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 PEX5P50542 639 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 IRAK1P51617 712 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 NOTUMQ6P988 496 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 OSBPL5Q9H0X9 879 aaPredicted RBP12.54□□□□□ -0.4
SIN3A-202ENST00000394947 EPB41L1Q9H4G0 881 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 MID1IP1Q9NPA3 183 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 GLRA3O75311 464 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 NCK1P16333 377 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 PCSK1P29120 753 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 CRATP43155 626 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 GSTM5P46439 218 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 TMEM132BQ14DG7 1078 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 SLFN11Q7Z7L1 901 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 ZC3H7AQ8IWR0 971 aaKnown RBP12.54□□□□□ -0.4
SIN3A-202ENST00000394947 RGL4Q8IZJ4 473 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 ZFYVE28Q9HCC9 887 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 SLC16A3O15427 465 aaKnown RBP12.54□□□□□ -0.4
SIN3A-202ENST00000394947 EPORP19235 508 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 NFKB1P19838 968 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 USP11P51784 963 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 SNAP47Q5SQN1 464 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 LRRN4Q8WUT4 740 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 SLC38A7Q9NVC3 462 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 TRPM5Q9NZQ8 1165 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 NUDT5Q9UKK9 219 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 PSMD9O00233 223 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 ZNF189O75820 626 aaPredicted RBP12.54□□□□□ -0.4
SIN3A-202ENST00000394947 HSPA13P48723 471 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 STARP49675 285 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 PKN1Q16512 942 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 CTXN3Q4LDR2 81 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 XKR3Q5GH77 459 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 MFSD7Q6UXD7 560 aa12.54□□□□□ -0.4
SIN3A-202ENST00000394947 TPGS1Q6ZTW0 290 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms