RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 HEY1Q9Y5J3 304 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 NFS1Q9Y697 457 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 COL4A6Q14031 1691 aa13.06□□□□□ -0.32
SSH2-203ENST00000394848 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.05□□□□□ -0.32
SSH2-203ENST00000394848 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.05□□□□□ -0.32
SSH2-203ENST00000394848 GOLGA8KD6RF30 607 aa13.05□□□□□ -0.32
SSH2-203ENST00000394848 H7C0C1 242 aa13.05□□□□□ -0.32
SSH2-203ENST00000394848 ADRA1BP35368 520 aa13.05□□□□□ -0.32
SSH2-203ENST00000394848 PBX3P40426 434 aa13.05□□□□□ -0.32
SSH2-203ENST00000394848 ATP5OP48047 213 aa13.05□□□□□ -0.32
SSH2-203ENST00000394848 ALDH7A1P49419 539 aaKnown RBP13.05□□□□□ -0.32
SSH2-203ENST00000394848 SLC5A3P53794 718 aa13.05□□□□□ -0.32
SSH2-203ENST00000394848 ROR1Q01973 937 aa13.05□□□□□ -0.32
SSH2-203ENST00000394848 HIBCHQ6NVY1 386 aaPredicted RBP13.05□□□□□ -0.32
SSH2-203ENST00000394848 VSTM1Q6UX27 236 aa13.05□□□□□ -0.32
SSH2-203ENST00000394848 FAM71DQ8N9W8 422 aa13.05□□□□□ -0.32
SSH2-203ENST00000394848 ADAM7Q9H2U9 754 aa13.05□□□□□ -0.32
SSH2-203ENST00000394848 SEMA4AQ9H3S1 761 aa13.05□□□□□ -0.32
SSH2-203ENST00000394848 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.05□□□□□ -0.32
SSH2-203ENST00000394848 VPS18Q9P253 973 aa13.05□□□□□ -0.32
SSH2-203ENST00000394848 RCOR3Q9P2K3 495 aaPredicted RBP13.05□□□□□ -0.32
SSH2-203ENST00000394848 FBXW11Q9UKB1 542 aa13.05□□□□□ -0.32
SSH2-203ENST00000394848 TPX2Q9ULW0 747 aaKnown RBP13.05□□□□□ -0.32
SSH2-203ENST00000394848 GRXCR1A8MXD5 290 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 H7C4K7 107 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 DNALI1O14645 258 aaPredicted RBP13.04□□□□□ -0.32
SSH2-203ENST00000394848 GOT1P17174 413 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 NR2C2P49116 596 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 AIF1P55008 147 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 GDF10P55107 478 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 ARPP19P56211 112 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 YWHAGP61981 247 aaKnown RBP eCLIP13.04□□□□□ -0.32
SSH2-203ENST00000394848 IFRD2Q12894 506 aaPredicted RBP13.04□□□□□ -0.32
SSH2-203ENST00000394848 DDR2Q16832 855 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 ARL13BQ3SXY8 428 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 EFHC2Q5JST6 749 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 CEP85LQ5SZL2 805 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 CHRDL2Q6WN34 429 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 B4GALNT4Q76KP1 1039 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 BEND5Q7L4P6 421 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 TAS1R1Q7RTX1 841 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 FIBCD1Q8N539 461 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 OR2W6PQ8NHA6 318 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 CLP1Q92989 425 aaKnown RBP13.04□□□□□ -0.32
SSH2-203ENST00000394848 NTAN1Q96AB6 310 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 C8orf48Q96LL4 319 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 PGLYRP2Q96PD5 576 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 FAM204AQ9H8W3 233 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 PRDM16Q9HAZ2 1276 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 WDR6Q9NNW5 1121 aaKnown RBP13.04□□□□□ -0.32
SSH2-203ENST00000394848 AAASQ9NRG9 546 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 TMPRSS4Q9NRS4 437 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 ABCC13Q9NSE7 274 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 PCDHA11Q9Y5I1 949 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 MRPL42Q9Y6G3 142 aaKnown RBP13.04□□□□□ -0.32
SSH2-203ENST00000394848 CARNS1A5YM72 827 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 H3BRJ5 948 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 NDC80O14777 642 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 TRIM66O15016 1216 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 LINC00271P0C7V0 271 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 AMPD1P23109 780 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 RPL22P35268 128 aaKnown RBP13.04□□□□□ -0.32
SSH2-203ENST00000394848 CHKAP35790 457 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 MAGEA11P43364 429 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 BTBD8Q5XKL5 378 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 ANKS3Q6ZW76 656 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 TRMT10CQ7L0Y3 403 aaKnown RBP13.04□□□□□ -0.32
SSH2-203ENST00000394848 PCGF5Q86SE9 256 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 TMEM173Q86WV6 379 aaPredicted RBP13.04□□□□□ -0.32
SSH2-203ENST00000394848 NUP93Q8N1F7 819 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 ATAD1Q8NBU5 361 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 ARL8AQ96BM9 186 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 TTPALQ9BTX7 342 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 FOXP3Q9BZS1 431 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 WDCPQ9H6R7 721 aa13.04□□□□□ -0.32
SSH2-203ENST00000394848 LCHNA4D1U4 455 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 GOLGA6L10A6NI86 522 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 CREB3O43889 395 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 TBC1D4O60343 1298 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 CPB1P15086 417 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 CXCR3P49682 368 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 GYS2P54840 703 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 EIF3BP55884 814 aaKnown RBP13.03□□□□□ -0.32
SSH2-203ENST00000394848 IFFO1Q0D2I5 559 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 GPR17Q13304 367 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 SLC29A2Q14542 456 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 MORF4L2Q15014 288 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 RTP2Q5QGT7 225 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 SDHAF4Q5VUM1 108 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 DENND2CQ68D51 928 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 RNF139Q8WU17 664 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 BCL7CQ8WUZ0 217 aaPredicted RBP13.03□□□□□ -0.32
SSH2-203ENST00000394848 PWWP2AQ96N64 755 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 OXCT2Q9BYC2 517 aaPredicted RBP13.03□□□□□ -0.32
SSH2-203ENST00000394848 EPB41L4BQ9H329 900 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 USP29Q9HBJ7 922 aa13.03□□□□□ -0.32
SSH2-203ENST00000394848 A0A1W2PPC1 479 aa13.02□□□□□ -0.32
SSH2-203ENST00000394848 BCLAF3A2AJT9 711 aaKnown RBP13.02□□□□□ -0.32
SSH2-203ENST00000394848 CFAP69A5D8W1 941 aa13.02□□□□□ -0.32
SSH2-203ENST00000394848 MAP3K6O95382 1288 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms