RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 RABGEF1Q9UJ41 708 aa13.65□□□□□ -0.22
NFKB1-202ENST00000394820 GRIN3BO60391 1043 aa13.65□□□□□ -0.23
NFKB1-202ENST00000394820 NPTXRO95502 500 aa13.65□□□□□ -0.23
NFKB1-202ENST00000394820 CYP2C8P10632 490 aa13.65□□□□□ -0.23
NFKB1-202ENST00000394820 UNGP13051 313 aaPredicted RBP13.65□□□□□ -0.23
NFKB1-202ENST00000394820 KDELR1P24390 212 aa13.65□□□□□ -0.23
NFKB1-202ENST00000394820 RTP1P59025 263 aa13.65□□□□□ -0.23
NFKB1-202ENST00000394820 OCRLQ01968 901 aa13.65□□□□□ -0.23
NFKB1-202ENST00000394820 ROR2Q01974 943 aaKnown RBP13.65□□□□□ -0.23
NFKB1-202ENST00000394820 PARP6Q2NL67 630 aa13.65□□□□□ -0.23
NFKB1-202ENST00000394820 RAB6CQ53S08 254 aa13.65□□□□□ -0.23
NFKB1-202ENST00000394820 CATSPER2Q96P56 530 aa13.65□□□□□ -0.23
NFKB1-202ENST00000394820 TMEM109Q9BVC6 243 aa13.65□□□□□ -0.23
NFKB1-202ENST00000394820 RAB6CQ9H0N0 254 aa13.65□□□□□ -0.23
NFKB1-202ENST00000394820 RNF103-CHMP3A0A140T963 221 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 E5RJQ4 531 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 USP2O75604 605 aaPredicted RBP13.64□□□□□ -0.23
NFKB1-202ENST00000394820 FARP2O94887 1054 aaPredicted RBP13.64□□□□□ -0.23
NFKB1-202ENST00000394820 STBD1O95210 358 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 YWHAEP62258 255 aaKnown RBP13.64□□□□□ -0.23
NFKB1-202ENST00000394820 DNAL1Q4LDG9 190 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 RWDD4Q6NW29 188 aaKnown RBP13.64□□□□□ -0.23
NFKB1-202ENST00000394820 ZNF333Q96JL9 665 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 KLHL4Q9C0H6 718 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 TASP1Q9H6P5 420 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 STRIP2Q9ULQ0 834 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 CLPTM1O96005 669 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 PLK1P53350 603 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 PTPN20Q4JDL3 420 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 ATF7IP2Q5U623 682 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 SATL1Q86VE3 508 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 TREML1Q86YW5 311 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 FAM172AQ8WUF8 416 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 CD101Q93033 1021 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 HDAC11Q96DB2 347 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 CDRT15Q96T59 188 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 PHACTR1Q9C0D0 580 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 CNTNAP2Q9UHC6 1331 aa13.64□□□□□ -0.23
NFKB1-202ENST00000394820 CRCPO75575 148 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 IL1R2P27930 398 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 PMLP29590 882 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 CYP1B1Q16678 543 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 RNASEH2BQ5TBB1 312 aaKnown RBP13.63□□□□□ -0.23
NFKB1-202ENST00000394820 PCDH20Q8N6Y1 951 aaKnown RBP13.63□□□□□ -0.23
NFKB1-202ENST00000394820 REPS2Q8NFH8 660 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 FBXL18Q96ME1 805 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 B3GNT5Q9BYG0 378 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 ACSS3Q9H6R3 686 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 CAB39LQ9H9S4 337 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 SOX13Q9UN79 622 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 AGRPO00253 132 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 ZNF286BP0CG31 522 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 MAP3K10Q02779 954 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 LRRC8EQ6NSJ5 796 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 STKLD1Q8NE28 680 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 AZIN2Q96A70 460 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 PCYT2Q99447 389 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 ECSITQ9BQ95 431 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 MRPL1Q9BYD6 325 aaKnown RBP13.63□□□□□ -0.23
NFKB1-202ENST00000394820 DHX33Q9H6R0 707 aaKnown RBP13.63□□□□□ -0.23
NFKB1-202ENST00000394820 PDP2Q9P2J9 529 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 SLC7A8Q9UHI5 535 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 KCNG1Q9UIX4 513 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 TSPAN8P19075 237 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 SLC1A6P48664 564 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 ATXN1P54253 815 aaKnown RBP13.63□□□□□ -0.23
NFKB1-202ENST00000394820 OLIG2Q13516 323 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 OASLQ15646 514 aaKnown RBP13.63□□□□□ -0.23
NFKB1-202ENST00000394820 PDPK2PQ6A1A2 396 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 MON1BQ7L1V2 547 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 CPXM1Q96SM3 734 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 ATXN3LQ9H3M9 355 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 PRKAG3Q9UGI9 489 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 SNX13Q9Y5W8 968 aa13.63□□□□□ -0.23
NFKB1-202ENST00000394820 A0A087WZ62 844 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 TMEM191CA6NGB0 347 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 CLUHO75153 1309 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 MGAT1P26572 445 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 EPHA3P29320 983 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 DYNC1I2Q13409 638 aaKnown RBP13.62□□□□□ -0.23
NFKB1-202ENST00000394820 CWF19L1Q69YN2 538 aaKnown RBP13.62□□□□□ -0.23
NFKB1-202ENST00000394820 CHST13Q8NET6 341 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 NDRG1Q92597 394 aaKnown RBP13.62□□□□□ -0.23
NFKB1-202ENST00000394820 KIF12Q96FN5 646 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 FDXACB1Q9BRP7 624 aaPredicted RBP13.62□□□□□ -0.23
NFKB1-202ENST00000394820 AVENQ9NQS1 362 aaPredicted RBP13.62□□□□□ -0.23
NFKB1-202ENST00000394820 ETNK2Q9NVF9 386 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 A8MXQ7 604 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 OGTO15294 1046 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 TM9SF1O15321 606 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 AHCYL1O43865 530 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 LRCH4O75427 683 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 P4HA1P13674 534 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 GARSP41250 739 aaKnown RBP13.62□□□□□ -0.23
NFKB1-202ENST00000394820 AQP4P55087 323 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 SNX32Q86XE0 403 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 NUP93Q8N1F7 819 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 SHKBP1Q8TBC3 707 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 CCT7Q99832 543 aa13.62□□□□□ -0.23
NFKB1-202ENST00000394820 MAGEB5Q9BZ81 275 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms