RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 DCAF4L1Q3SXM0 396 aa12.02□□□□□ -0.48
UBE2D3-209ENST00000394804 SPDYAQ5MJ70 313 aa12.02□□□□□ -0.48
UBE2D3-209ENST00000394804 DSTYKQ6XUX3 929 aa12.02□□□□□ -0.48
UBE2D3-209ENST00000394804 REPS2Q8NFH8 660 aa12.02□□□□□ -0.48
UBE2D3-209ENST00000394804 TMEM174Q8WUU8 243 aa12.02□□□□□ -0.48
UBE2D3-209ENST00000394804 HDAC11Q96DB2 347 aa12.02□□□□□ -0.48
UBE2D3-209ENST00000394804 ZNF670Q9BS34 389 aa12.02□□□□□ -0.48
UBE2D3-209ENST00000394804 NRDE2Q9H7Z3 1164 aa12.02□□□□□ -0.48
UBE2D3-209ENST00000394804 STX18Q9P2W9 335 aaKnown RBP12.02□□□□□ -0.48
UBE2D3-209ENST00000394804 C2orf71A6NGG8 1288 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 SPDYE16A6NNV3 312 aaPredicted RBP12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 BIRC5O15392 142 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 APOA4P06727 396 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 HSPA8P11142 646 aaKnown RBP12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 AMPD1P23109 780 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 MOGSQ13724 837 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 LAMC2Q13753 1193 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 ZC3H12AQ5D1E8 599 aaKnown RBP12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 SLC4A11Q8NBS3 891 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 MCUQ8NE86 351 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 C7orf26Q96N11 449 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 KLHL4Q9C0H6 718 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 SUDS3Q9H7L9 328 aaPredicted RBP12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 PLEKHA5Q9HAU0 1116 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 PTPRJQ12913 1337 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 COL2A1P02458 1487 aaPredicted RBP12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 CNTNAP1P78357 1384 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 B4GALT5O43286 388 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 MTSS1O43312 755 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 TYROBPO43914 113 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 MGAT1P26572 445 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 ESRRGP62508 458 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 POU5F1BQ06416 359 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 BST2Q10589 180 aaKnown RBP12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 WASHC5Q12768 1159 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 TNFAIP8L3Q5GJ75 292 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 GLRA4Q5JXX5 417 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 TAS1R3Q7RTX0 852 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 SERAC1Q96JX3 654 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 FSD1LQ9BXM9 530 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 NKX1-2Q9UD57 310 aaPredicted RBP12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 SLC39A10Q9ULF5 831 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 STYXL1Q9Y6J8 313 aa12.02□□□□□ -0.49
UBE2D3-209ENST00000394804 ARHGAP10A1A4S6 786 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 CCDC78A2IDD5 438 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 C3orf70A6NLC5 250 aaPredicted RBP12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 E9PBE3 544 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 TIMM44O43615 452 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 KLHL41O60662 606 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 FAM155BO75949 473 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 SERPINA6P08185 405 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 THRAP10827 490 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 INSRRP14616 1297 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 ANPEPP15144 967 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 PGAM1P18669 254 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 TBL3Q12788 808 aaKnown RBP12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 FLOT2Q14254 428 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 RAB44Q7Z6P3 723 aaPredicted RBP12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 ULK2Q8IYT8 1036 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 ACMSDQ8TDX5 336 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 DCAKDQ8WVC6 231 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 TRPV6Q9H1D0 765 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 PCDH18Q9HCL0 1135 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 NSMCE4AQ9NXX6 385 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 ZNF180Q9UJW8 692 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 FZD1Q9UP38 647 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 M0QYT0 321 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 IL1R2P27930 398 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 ICAM3P32942 547 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 NAB1Q13506 487 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 MAPRE2Q15555 327 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 GSTA3Q16772 222 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 TWF2Q6IBS0 349 aaKnown RBP12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 ASRGL1Q7L266 308 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 STRA8Q7Z7C7 330 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 PIH1D1Q9NWS0 290 aaKnown RBP12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 TAS2R1Q9NYW7 299 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 UBQLN1Q9UMX0 589 aaKnown RBP12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 FAF1Q9UNN5 650 aaPredicted RBP12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 CDYLQ9Y232 598 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 PCDHA11Q9Y5I1 949 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 HACD1B0YJ81 288 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 AHCYL1O43865 530 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 PFDN1O60925 122 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 BPGMP07738 259 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 TAF5Q15542 800 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 RFWD3Q6PCD5 774 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 UNC5AQ6ZN44 842 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 METTL23Q86XA0 190 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 NT5DC4Q86YG4 428 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 PLD5Q8N7P1 536 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 DENND1AQ8TEH3 1009 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 TMA16Q96EY4 203 aaKnown RBP12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 FAM192AQ9GZU8 254 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 ZNF214Q9UL59 606 aaPredicted RBP12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 PIN4Q9Y237 131 aaKnown RBP12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 SSX2IPQ9Y2D8 614 aa12.01□□□□□ -0.49
UBE2D3-209ENST00000394804 TCRBV7S3A2A0A539 114 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 RNF103O00237 685 aa12□□□□□ -0.49
UBE2D3-209ENST00000394804 H2AFYO75367 372 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms