RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 LINC00597Q9H2U6 94 aa8.4□□□□□ -1.06
CASP4-201ENST00000393150 DDX19AQ9NUU7 478 aaKnown RBP8.4□□□□□ -1.06
CASP4-201ENST00000393150 CALCOCO1Q9P1Z2 691 aa8.4□□□□□ -1.06
CASP4-201ENST00000393150 LARSQ9P2J5 1176 aaKnown RBP8.4□□□□□ -1.06
CASP4-201ENST00000393150 CYP8B1Q9UNU6 501 aa8.4□□□□□ -1.06
CASP4-201ENST00000393150 NFE2L3Q9Y4A8 694 aa8.4□□□□□ -1.06
CASP4-201ENST00000393150 PCDHGB2Q9Y5G2 931 aa8.4□□□□□ -1.06
CASP4-201ENST00000393150 ZNF462Q96JM2 2506 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 H3BRJ5 948 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 LEFTY2O00292 366 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 HNRNPDLO14979 420 aaKnown RBP8.39□□□□□ -1.07
CASP4-201ENST00000393150 OGTO15294 1046 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 BCAT2O15382 392 aaPredicted RBP8.39□□□□□ -1.07
CASP4-201ENST00000393150 NOL4O94818 638 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 PLS3P13797 630 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 OPRD1P41143 372 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 GRK6P43250 576 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 RACK1P63244 317 aaKnown RBP8.39□□□□□ -1.07
CASP4-201ENST00000393150 SEMG2Q02383 582 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 SCRN1Q12765 414 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 MAPRE1Q15691 268 aaKnown RBP8.39□□□□□ -1.07
CASP4-201ENST00000393150 ZBTB6Q15916 424 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 DDR2Q16832 855 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 WSCD1Q658N2 575 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 KIAA1324Q6UXG2 1013 aaKnown RBP8.39□□□□□ -1.07
CASP4-201ENST00000393150 LINC00114Q6XXX2 140 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 FILIP1Q7Z7B0 1213 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 TMEM150AQ86TG1 271 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 ADGRG2Q8IZP9 1017 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 FRMD1Q8N878 549 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 CACTINQ8WUQ7 758 aaKnown RBP8.39□□□□□ -1.07
CASP4-201ENST00000393150 EZH1Q92800 747 aaPredicted RBP8.39□□□□□ -1.07
CASP4-201ENST00000393150 SKA1Q96BD8 255 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 OTUB2Q96DC9 234 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 MYRFLQ96LU7 910 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 CEP295NLQ96MC4 621 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 ACBD6Q9BR61 282 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 NTPCRQ9BSD7 190 aaKnown RBP8.39□□□□□ -1.07
CASP4-201ENST00000393150 MSTO1Q9BUK6 570 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 ASB7Q9H672 318 aa8.39□□□□□ -1.07
CASP4-201ENST00000393150 SRA1Q9HD15 236 aaKnown RBP8.39□□□□□ -1.07
CASP4-201ENST00000393150 NOL7Q9UMY1 257 aaKnown RBP8.39□□□□□ -1.07
CASP4-201ENST00000393150 A0A0A0MRY4 1105 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 IGHV1OR15-9A0A0B4J2B8 117 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 KPNA7A9QM74 516 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 LINC01387J3KSC0 135 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 PIRO00625 290 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 CILPO75339 1184 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 CYP17A1P05093 508 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 ACADMP11310 421 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 AMPD1P23109 780 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 CD6P30203 668 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 CDC25BP30305 580 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 ACTN2P35609 894 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 GRIK1P39086 918 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 LHX1P48742 406 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 CDR1P51861 262 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 SNRPNP63162 240 aaKnown RBP8.38□□□□□ -1.07
CASP4-201ENST00000393150 KDSRQ06136 332 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 PDIA5Q14554 519 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 ANO4Q32M45 955 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 ZNF394Q53GI3 561 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 C10orf76Q5T2E6 689 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 JADE1Q6IE81 842 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 DIS3L2Q8IYB7 885 aaKnown RBP8.38□□□□□ -1.07
CASP4-201ENST00000393150 TMEM86AQ8N2M4 240 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 SVOPQ8N4V2 548 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 CADM4Q8NFZ8 388 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 LEO1Q8WVC0 666 aaPredicted RBP8.38□□□□□ -1.07
CASP4-201ENST00000393150 WBP1Q96G27 269 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 FUBP3Q96I24 572 aaKnown RBP eCLIP8.38□□□□□ -1.07
CASP4-201ENST00000393150 CDK5RAP3Q96JB5 506 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 SLITRK1Q96PX8 696 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 XPO6Q96QU8 1125 aaKnown RBP8.38□□□□□ -1.07
CASP4-201ENST00000393150 RSRP1Q9BUV0 290 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 CEP44Q9C0F1 390 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 NACA2Q9H009 215 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 PRORYQ9H606 182 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 DPP3Q9NY33 737 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 KCND2Q9NZV8 630 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 MAGEC2Q9UBF1 373 aaPredicted RBP8.38□□□□□ -1.07
CASP4-201ENST00000393150 FTSJ1Q9UET6 329 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 GGT7Q9UJ14 662 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 SH3BP1Q9Y3L3 701 aa8.38□□□□□ -1.07
CASP4-201ENST00000393150 LOC100996750A0A140TA64 210 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 FAM181BA6NEQ2 426 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 BTBD18B2RXH4 712 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 LAD1O00515 517 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 DFNA5O60443 496 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 SYNCRIPO60506 623 aaKnown RBP8.37□□□□□ -1.07
CASP4-201ENST00000393150 CBFA2T3O75081 653 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 GJB3O75712 270 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 C1SP09871 688 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 ATXN1LP0C7T5 689 aaKnown RBP8.37□□□□□ -1.07
CASP4-201ENST00000393150 NCAM1P13591 858 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 GABRG2P18507 467 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 BMP6P22004 513 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 CYP2F1P24903 491 aa8.37□□□□□ -1.07
CASP4-201ENST00000393150 EIF2S3P41091 472 aaKnown RBP8.37□□□□□ -1.07
CASP4-201ENST00000393150 KIR2DL1P43626 348 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms