RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 SDCBP2Q9H190 292 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 B2RBV5 119 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 TMEM63AO94886 807 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 YY1P25490 414 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 GSTT1P30711 240 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 WDR4P57081 412 aaKnown RBP10.87□□□□□ -0.67
CALD1-203ENST00000393118 GBE1Q04446 702 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 ASPHQ12797 758 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 KLF1Q13351 362 aaPredicted RBP10.87□□□□□ -0.67
CALD1-203ENST00000393118 TAF12Q16514 161 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 COLGALT1Q8NBJ5 622 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 MCUQ8NE86 351 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 ZNF570Q96NI8 536 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 DDX50Q9BQ39 737 aaKnown RBP10.87□□□□□ -0.67
CALD1-203ENST00000393118 TUBB6Q9BUF5 446 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 TMEM120AQ9BXJ8 343 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 ABHD16BQ9H3Z7 469 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 ACSS3Q9H6R3 686 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 SIX4Q9UIU6 781 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 CLDN5O00501 218 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 CFLARO15519 480 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 C22orf31O95567 290 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 KLRC2P26717 231 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 ABCG1P45844 678 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 PDK1Q15118 436 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 RCN1Q15293 331 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 SPRED3Q2MJR0 410 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 ILDR2Q71H61 639 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 ANKS1BQ7Z6G8 1248 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 CCNYL1Q8N7R7 359 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 MAGEC3Q8TD91 643 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 FAM193BQ96PV7 902 aaPredicted RBP10.87□□□□□ -0.67
CALD1-203ENST00000393118 LGMNQ99538 433 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 NDNQ99608 321 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 EIF2AQ9BY44 585 aaKnown RBP10.87□□□□□ -0.67
CALD1-203ENST00000393118 TXLNGYQ9BZA5 131 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 WWP1Q9H0M0 922 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 KRT82Q9NSB4 513 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 ETNK2Q9NVF9 386 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 THSD7AQ9UPZ6 1657 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 A0A0G2JLL6 359 aaPredicted RBP10.87□□□□□ -0.67
CALD1-203ENST00000393118 LOC100653049A0A140TA62 436 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.87□□□□□ -0.67
CALD1-203ENST00000393118 WDR27A2RRH5 827 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 CASTOR2A6NHX0 329 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 KRT34O76011 436 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 B3GAT3O94766 335 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 GTF2A2P52657 109 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 NCALDP61601 193 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 BTKQ06187 659 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 THOC5Q13769 683 aaKnown RBP10.87□□□□□ -0.67
CALD1-203ENST00000393118 SH3D19Q5HYK7 790 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 NOL9Q5SY16 702 aaKnown RBP10.87□□□□□ -0.67
CALD1-203ENST00000393118 C1orf146Q5VVC0 180 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 PRRT2Q7Z6L0 340 aaPredicted RBP10.87□□□□□ -0.67
CALD1-203ENST00000393118 WDTC1Q8N5D0 677 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 DRAXINQ8NBI3 349 aaPredicted RBP10.87□□□□□ -0.67
CALD1-203ENST00000393118 XAB2Q9HCS7 855 aaKnown RBP10.87□□□□□ -0.67
CALD1-203ENST00000393118 LZTS1Q9Y250 596 aa10.87□□□□□ -0.67
CALD1-203ENST00000393118 CCDC22O60826 627 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 GOT1P17174 413 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 TKTL1P51854 596 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 HUNKP57058 714 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 RPL10AP62906 217 aaKnown RBP10.86□□□□□ -0.67
CALD1-203ENST00000393118 ACAP1Q15027 740 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 PDK4Q16654 411 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 GRAMD1BQ3KR37 738 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 C16orf46Q6P387 395 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 PIGWQ7Z7B1 504 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 ECHDC2Q86YB7 292 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 RNF135Q8IUD6 432 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 TINF2Q9BSI4 451 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 MECRQ9BV79 373 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 NRDE2Q9H7Z3 1164 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 PCDH18Q9HCL0 1135 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 ACTL7BQ9Y614 415 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 C5orf60A6NFR6 353 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 PPEF2O14830 753 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 HCRTO43612 131 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 TMCC1O94876 653 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 IVDP26440 423 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 GPD2P43304 727 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 GHRHRQ02643 423 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 OTOAQ7RTW8 1153 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 PIGZQ86VD9 579 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 SIKE1Q9BRV8 207 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 THTPAQ9BU02 230 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 FSD1LQ9BXM9 530 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 XYLT2Q9H1B5 865 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 DPEP3Q9H4B8 488 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 CDK5RAP2Q96SN8 1893 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 NEMP1O14524 444 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 HNRNPRO43390 633 aaKnown RBP10.86□□□□□ -0.67
CALD1-203ENST00000393118 TSPAN1O60635 241 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 LMNAP02545 664 aaKnown RBP10.86□□□□□ -0.67
CALD1-203ENST00000393118 MX2P20592 715 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 TGM2P21980 687 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 MGAT1P26572 445 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 CDC42EP1Q00587 391 aa10.86□□□□□ -0.67
CALD1-203ENST00000393118 MSS51Q4VC12 460 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms