RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 MYO1AQ9UBC5 1043 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 PPARGC1AQ9UBK2 798 aaKnown RBP13.81□□□□□ -0.2
USP44-202ENST00000393091 PDGFRAP16234 1089 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 SLC25A11Q02978 314 aaKnown RBP13.81□□□□□ -0.2
USP44-202ENST00000393091 TAZQ16635 292 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 LACRTQ9GZZ8 138 aa13.81□□□□□ -0.2
USP44-202ENST00000393091 LEFTY2O00292 366 aa13.8□□□□□ -0.2
USP44-202ENST00000393091 GLULP15104 373 aa13.8□□□□□ -0.2
USP44-202ENST00000393091 STXBP5Q5T5C0 1151 aa13.8□□□□□ -0.2
USP44-202ENST00000393091 DNASE1L2Q92874 299 aa13.8□□□□□ -0.2
USP44-202ENST00000393091 BTN2A3PQ96KV6 586 aa13.8□□□□□ -0.2
USP44-202ENST00000393091 RCOR3Q9P2K3 495 aaPredicted RBP13.8□□□□□ -0.2
USP44-202ENST00000393091 SALL4Q9UJQ4 1053 aa13.8□□□□□ -0.2
USP44-202ENST00000393091 SLC9A3R1O14745 358 aaPredicted RBP13.8□□□□□ -0.2
USP44-202ENST00000393091 CHADO15335 359 aa13.8□□□□□ -0.2
USP44-202ENST00000393091 ZSCAN12O43309 604 aa13.8□□□□□ -0.2
USP44-202ENST00000393091 DESP17661 470 aa13.8□□□□□ -0.2
USP44-202ENST00000393091 PDGFRLQ15198 375 aa13.8□□□□□ -0.2
USP44-202ENST00000393091 DCAF6Q58WW2 860 aa13.8□□□□□ -0.2
USP44-202ENST00000393091 C10orf120Q5SQS8 335 aa13.8□□□□□ -0.2
USP44-202ENST00000393091 TTC39BQ5VTQ0 682 aaPredicted RBP13.8□□□□□ -0.2
USP44-202ENST00000393091 ARL14EPQ8N8R7 260 aaPredicted RBP13.8□□□□□ -0.2
USP44-202ENST00000393091 RSPRY1Q96DX4 576 aa13.8□□□□□ -0.2
USP44-202ENST00000393091 FAM83CQ9BQN1 747 aa13.8□□□□□ -0.2
USP44-202ENST00000393091 PIGVQ9NUD9 493 aa13.8□□□□□ -0.2
USP44-202ENST00000393091 FZD10Q9ULW2 581 aa13.8□□□□□ -0.2
USP44-202ENST00000393091 NEU3Q9UQ49 428 aa13.8□□□□□ -0.2
USP44-202ENST00000393091 DRGXA6NNA5 263 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 WASH4PA8MWX3 477 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 TMCO5BA8MYB1 307 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 C2CD4DB7Z1M9 353 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 CCR1P32246 355 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 PTPN7P35236 360 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 TBX4P57082 545 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 CCDC85BQ15834 202 aaPredicted RBP13.79□□□□□ -0.2
USP44-202ENST00000393091 ARID3BQ8IVW6 561 aaPredicted RBP13.79□□□□□ -0.2
USP44-202ENST00000393091 MAB21L3Q8N8X9 362 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 OSCP1Q8WVF1 389 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 TSC1Q92574 1164 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 SPDYE4A6NLX3 237 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 H3BQ06 376 aaPredicted RBP13.79□□□□□ -0.2
USP44-202ENST00000393091 KRT86O43790 486 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 LRCH4O75427 683 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 PRAMEF12O95522 483 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 SULT1E1P49888 294 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 KIF5AQ12840 1032 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 VITQ6UXI7 678 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 RIN3Q8TB24 985 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 CFAP57Q96MR6 1250 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 FBXO10Q9UK96 956 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 CPQQ9Y646 472 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 PSTPIP1O43586 416 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 AVPR1AP37288 418 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 ARHGAP29Q52LW3 1261 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 GPIHBP1Q8IV16 184 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 SYCE1Q8N0S2 351 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 ATP6V0D2Q8N8Y2 350 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 FAF2Q96CS3 445 aa13.79□□□□□ -0.2
USP44-202ENST00000393091 DDX50Q9BQ39 737 aaKnown RBP13.79□□□□□ -0.2
USP44-202ENST00000393091 MIA3Q5JRA6 1907 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 GOLGA8SH3BPF8 625 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 PIK3R2O00459 728 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 ATMINO43313 823 aaPredicted RBP13.78□□□□□ -0.2
USP44-202ENST00000393091 CSPG5O95196 566 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 VASPP50552 380 aaPredicted RBP13.78□□□□□ -0.2
USP44-202ENST00000393091 C2CD6Q53TS8 623 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 DCUN1D2Q6PH85 259 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 GET4Q7L5D6 327 aaPredicted RBP13.78□□□□□ -0.2
USP44-202ENST00000393091 KIAA0907Q7Z7F0 614 aaPredicted RBP13.78□□□□□ -0.2
USP44-202ENST00000393091 EDEM1Q92611 657 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 ZFP14Q9HCL3 533 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 OSGEPQ9NPF4 335 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 MYO1FO00160 1098 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 CAPN9O14815 690 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 HOXC11O43248 304 aaPredicted RBP13.78□□□□□ -0.2
USP44-202ENST00000393091 PENKP01210 267 aaPredicted RBP13.78□□□□□ -0.2
USP44-202ENST00000393091 C7P10643 843 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 MBL2P11226 248 aaPredicted RBP13.78□□□□□ -0.2
USP44-202ENST00000393091 TFE3P19532 575 aaPredicted RBP13.78□□□□□ -0.2
USP44-202ENST00000393091 ABCB4P21439 1286 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 DEUP1Q05D60 604 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 DPYSL2Q16555 572 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 BOLA3Q53S33 107 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 SND1Q7KZF4 910 aaKnown RBP eCLIP13.78□□□□□ -0.2
USP44-202ENST00000393091 KIAA1524Q8TCG1 905 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 BPIFB1Q8TDL5 484 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 FAM172AQ8WUF8 416 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 FAM149B1Q96BN6 582 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 LRRC3BQ96PB8 259 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 CTTNBP2NLQ9P2B4 639 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 ANAPC7Q9UJX3 599 aa13.78□□□□□ -0.2
USP44-202ENST00000393091 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
USP44-202ENST00000393091 A0A0A0MRY4 1105 aa13.77□□□□□ -0.2
USP44-202ENST00000393091 M0QYT0 321 aa13.77□□□□□ -0.2
USP44-202ENST00000393091 KLKB1P03952 638 aa13.77□□□□□ -0.2
USP44-202ENST00000393091 ADRA1BP35368 520 aa13.77□□□□□ -0.2
USP44-202ENST00000393091 EIF2DP41214 584 aaKnown RBP13.77□□□□□ -0.2
USP44-202ENST00000393091 PITX1P78337 314 aaPredicted RBP13.77□□□□□ -0.2
USP44-202ENST00000393091 EML3Q32P44 896 aa13.77□□□□□ -0.2
USP44-202ENST00000393091 FAM133BQ5BKY9 247 aaKnown RBP13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms