RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.55■□□□□ 0.08
SHTN1-204ENST00000392903 HSF5Q4G112 596 aaPredicted RBP15.55■□□□□ 0.08
SHTN1-204ENST00000392903 SFT2D3Q587I9 215 aa15.55■□□□□ 0.08
SHTN1-204ENST00000392903 MAP3K21Q5TCX8 1036 aa15.55■□□□□ 0.08
SHTN1-204ENST00000392903 C3orf62Q6ZUJ4 267 aa15.55■□□□□ 0.08
SHTN1-204ENST00000392903 ILDR2Q71H61 639 aa15.55■□□□□ 0.08
SHTN1-204ENST00000392903 NMD3Q96D46 503 aaKnown RBP15.55■□□□□ 0.08
SHTN1-204ENST00000392903 HPDLQ96IR7 371 aa15.55■□□□□ 0.08
SHTN1-204ENST00000392903 FAM111AQ96PZ2 611 aa15.55■□□□□ 0.08
SHTN1-204ENST00000392903 C16orf70Q9BSU1 422 aa15.55■□□□□ 0.08
SHTN1-204ENST00000392903 CXCL16Q9H2A7 254 aa15.55■□□□□ 0.08
SHTN1-204ENST00000392903 TUT1Q9H6E5 874 aaKnown RBP15.55■□□□□ 0.08
SHTN1-204ENST00000392903 SSX2IPQ9Y2D8 614 aa15.55■□□□□ 0.08
SHTN1-204ENST00000392903 KAT6AQ92794 2004 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 E5RJQ4 531 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 PFDN1O60925 122 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 LRCH4O75427 683 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 VCLP18206 1134 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 TPP2P29144 1249 aaPredicted RBP15.54■□□□□ 0.08
SHTN1-204ENST00000392903 VCPP55072 806 aaKnown RBP15.54■□□□□ 0.08
SHTN1-204ENST00000392903 SLC18A2Q05940 514 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 PTPN11Q06124 597 aaPredicted RBP15.54■□□□□ 0.08
SHTN1-204ENST00000392903 KDSRQ06136 332 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 SFSWAPQ12872 951 aaKnown RBP15.54■□□□□ 0.08
SHTN1-204ENST00000392903 MSLNQ13421 630 aaPredicted RBP15.54■□□□□ 0.08
SHTN1-204ENST00000392903 LRRC38Q5VT99 294 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 SH2D5Q6ZV89 423 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 PCGF5Q86SE9 256 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 TAB3Q8N5C8 712 aaPredicted RBP15.54■□□□□ 0.08
SHTN1-204ENST00000392903 CXorf38Q8TB03 319 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 ZC3H15Q8WU90 426 aaKnown RBP15.54■□□□□ 0.08
SHTN1-204ENST00000392903 TTC17Q96AE7 1141 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 KLHL4Q9C0H6 718 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 RNF19AQ9NV58 838 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 CLIC5Q9NZA1 410 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 SGK1O00141 431 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 ATP5BP06576 529 aaKnown RBP15.54■□□□□ 0.08
SHTN1-204ENST00000392903 ITGAVP06756 1048 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 CD48P09326 243 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 FAM163BP0C2L3 166 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 MCF2P10911 925 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 ERFP50548 548 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 CHN2P52757 468 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 HPCAP84074 193 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 TAP1Q03518 808 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 DEUP1Q05D60 604 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 CDK18Q07002 472 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 TAF5Q15542 800 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 LDLRAD1Q5T700 205 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 MAP1SQ66K74 1059 aaPredicted RBP15.54■□□□□ 0.08
SHTN1-204ENST00000392903 SHCBP1Q8NEM2 672 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 PPTC7Q8NI37 304 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 TMEM176AQ96HP8 235 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 C7orf26Q96N11 449 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 NFKBIZQ9BYH8 718 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 LHX5Q9H2C1 402 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.54■□□□□ 0.08
SHTN1-204ENST00000392903 PPARGC1AQ9UBK2 798 aaKnown RBP15.54■□□□□ 0.08
SHTN1-204ENST00000392903 CLEC11AQ9Y240 323 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 PCDHGA4Q9Y5G9 962 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 TRIP11Q15643 1979 aa15.54■□□□□ 0.08
SHTN1-204ENST00000392903 DCAF8L1A6NGE4 600 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 E7ESA3 106 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 M0QYV0 167 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 CILPO75339 1184 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 MICAL2O94851 1124 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 OR6B1O95007 311 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 TMEM132DQ14C87 1099 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 FAM182AQ5T1J6 154 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 KLC3Q6P597 504 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 XYLT1Q86Y38 959 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 NKD2Q969F2 451 aaPredicted RBP15.53■□□□□ 0.08
SHTN1-204ENST00000392903 CCDC106Q9BWC9 280 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 WWP1Q9H0M0 922 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 PLXNA1Q9UIW2 1896 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 A0A088AWK7 358 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 IQANK1A0A1B0GTG1 560 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 GOLGA8MH3BSY2 632 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 PIAS1O75925 651 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 SNAI1O95863 264 aaPredicted RBP15.53■□□□□ 0.08
SHTN1-204ENST00000392903 TSHRP16473 764 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 CCNA1P78396 465 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 SLC25A11Q02978 314 aaKnown RBP15.53■□□□□ 0.08
SHTN1-204ENST00000392903 TNFAIP2Q03169 654 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 PDK3Q15120 406 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 KIZQ2M2Z5 673 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 MSS51Q4VC12 460 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 UGT2A3Q6UWM9 527 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 B3GNT6Q6ZMB0 384 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 DPP9Q86TI2 863 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 PRPF39Q86UA1 669 aaKnown RBP15.53■□□□□ 0.08
SHTN1-204ENST00000392903 SLC25A41Q8N5S1 370 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 NIPA2Q8N8Q9 360 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 C12orf29Q8N999 325 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 PPP1R14BQ96C90 147 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 PRICKLE1Q96MT3 831 aaPredicted RBP15.53■□□□□ 0.08
SHTN1-204ENST00000392903 CATSPER2Q96P56 530 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 WDR83Q9BRX9 315 aaKnown RBP15.53■□□□□ 0.08
SHTN1-204ENST00000392903 BLOC1S6Q9UL45 172 aa15.53■□□□□ 0.08
SHTN1-204ENST00000392903 C3orf70A6NLC5 250 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms