RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 UGT1A9O60656 530 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 KRT38O76015 456 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 PDE5AO76074 875 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 TOP3BO95985 862 aaKnown RBP11.22□□□□□ -0.61
BRF1-204ENST00000392557 MCF2P10911 925 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 CYP2C9P11712 490 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 ZNF157P51786 506 aaPredicted RBP11.22□□□□□ -0.61
BRF1-204ENST00000392557 ZNF132P52740 706 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 SLC25A3Q00325 362 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 PDE1BQ01064 536 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 PTPN11Q06124 597 aaPredicted RBP11.22□□□□□ -0.61
BRF1-204ENST00000392557 PPP1R15BQ5SWA1 713 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 TTC39BQ5VTQ0 682 aaPredicted RBP11.22□□□□□ -0.61
BRF1-204ENST00000392557 C16orf46Q6P387 395 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 CDHR3Q6ZTQ4 885 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 ILDR2Q71H61 639 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 SLC35B2Q8TB61 432 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 DNAJB3Q8WWF6 145 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 PPP1R36Q96LQ0 422 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 ELOVL4Q9GZR5 314 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 UGT1A7Q9HAW7 530 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 UGT1A10Q9HAW8 530 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 UGT1A8Q9HAW9 530 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 COX16Q9P0S2 106 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 CYTH4Q9UIA0 394 aa11.22□□□□□ -0.61
BRF1-204ENST00000392557 PRR5-ARHGAP8B1AHC4 643 aa11.21□□□□□ -0.61
BRF1-204ENST00000392557 ETS2P15036 469 aa11.21□□□□□ -0.61
BRF1-204ENST00000392557 PDGFRAP16234 1089 aa11.21□□□□□ -0.61
BRF1-204ENST00000392557 NDST1P52848 882 aa11.21□□□□□ -0.61
BRF1-204ENST00000392557 MCCD1P59942 119 aaPredicted RBP11.21□□□□□ -0.61
BRF1-204ENST00000392557 ARHGAP8P85298 464 aa11.21□□□□□ -0.61
BRF1-204ENST00000392557 TAP1Q03518 808 aa11.21□□□□□ -0.61
BRF1-204ENST00000392557 STX3Q13277 289 aa11.21□□□□□ -0.61
BRF1-204ENST00000392557 PPP2R5DQ14738 602 aa11.21□□□□□ -0.61
BRF1-204ENST00000392557 C15orf59Q2T9L4 293 aaPredicted RBP11.21□□□□□ -0.61
BRF1-204ENST00000392557 SH3PXD2AQ5TCZ1 1133 aa11.21□□□□□ -0.61
BRF1-204ENST00000392557 TMPRSS6Q8IU80 811 aa11.21□□□□□ -0.61
BRF1-204ENST00000392557 ZNF398Q8TD17 642 aa11.21□□□□□ -0.61
BRF1-204ENST00000392557 SH3TC2Q8TF17 1288 aa11.21□□□□□ -0.61
BRF1-204ENST00000392557 GTF3C2Q8WUA4 911 aaPredicted RBP11.21□□□□□ -0.61
BRF1-204ENST00000392557 EIF2AQ9BY44 585 aaKnown RBP11.21□□□□□ -0.61
BRF1-204ENST00000392557 PIN4Q9Y237 131 aaKnown RBP11.21□□□□□ -0.61
BRF1-204ENST00000392557 PPEF2O14830 753 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 MED7O43513 233 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 AHCYL1O43865 530 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 P4HA1P13674 534 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 DSG1Q02413 1049 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 ASPHQ12797 758 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 HIC1Q14526 733 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 LRRC38Q5VT99 294 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 DRICH1Q6PGQ1 229 aaPredicted RBP11.21□□□□□ -0.62
BRF1-204ENST00000392557 WDR75Q8IWA0 830 aaKnown RBP11.21□□□□□ -0.62
BRF1-204ENST00000392557 GSTCDQ8NEC7 633 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 KLC2Q9H0B6 622 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 MICAL2O94851 1124 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 DLDP09622 509 aaKnown RBP11.21□□□□□ -0.62
BRF1-204ENST00000392557 SLC18A1P54219 525 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 ATXN3P54252 364 aaPredicted RBP11.21□□□□□ -0.62
BRF1-204ENST00000392557 CTC1Q2NKJ3 1217 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 BBS12Q6ZW61 710 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 ANKRD23Q86SG2 305 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 TREML1Q86YW5 311 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 TRIM42Q8IWZ5 723 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 C18orf25Q96B23 403 aaPredicted RBP11.21□□□□□ -0.62
BRF1-204ENST00000392557 TMEM176AQ96HP8 235 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 LPIN3Q9BQK8 851 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 SEPT10Q9P0V9 454 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 STX18Q9P2W9 335 aaKnown RBP11.21□□□□□ -0.62
BRF1-204ENST00000392557 PACSIN3Q9UKS6 424 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 CNTN6Q9UQ52 1028 aa11.21□□□□□ -0.62
BRF1-204ENST00000392557 CXorf49A8MYA2 514 aaPredicted RBP11.2□□□□□ -0.62
BRF1-204ENST00000392557 RPL10AP62906 217 aaKnown RBP11.2□□□□□ -0.62
BRF1-204ENST00000392557 AP1B1Q10567 949 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 MARCH8Q5T0T0 291 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 POLNQ7Z5Q5 900 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 ACOT1Q86TX2 421 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 ULK2Q8IYT8 1036 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 SLC4A11Q8NBS3 891 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 OR6B3Q8NGW1 331 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 PTCD3Q96EY7 689 aaKnown RBP11.2□□□□□ -0.62
BRF1-204ENST00000392557 NXF3Q9H4D5 531 aaKnown RBP11.2□□□□□ -0.62
BRF1-204ENST00000392557 ASNSD1Q9NWL6 643 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 APOBEC2Q9Y235 224 aaKnown RBP11.2□□□□□ -0.62
BRF1-204ENST00000392557 FARP1Q9Y4F1 1045 aaPredicted RBP11.2□□□□□ -0.62
BRF1-204ENST00000392557 APOC4-APOC2K7ER74 178 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 TRAFD1O14545 582 aaPredicted RBP11.2□□□□□ -0.62
BRF1-204ENST00000392557 LYPLA1O75608 230 aaPredicted RBP11.2□□□□□ -0.62
BRF1-204ENST00000392557 STK10O94804 968 aaKnown RBP11.2□□□□□ -0.62
BRF1-204ENST00000392557 APOC2P02655 101 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 PDGFRBP09619 1106 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 ANPEPP15144 967 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 RBL1P28749 1068 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 GRB14Q14449 540 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 PRKD1Q15139 912 aaPredicted RBP11.2□□□□□ -0.62
BRF1-204ENST00000392557 FAM110CQ1W6H9 321 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 RABGAP1LQ5R372 815 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 SDCCAG8Q86SQ7 713 aaPredicted RBP11.2□□□□□ -0.62
BRF1-204ENST00000392557 TLK2Q86UE8 772 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 MAP7D3Q8IWC1 876 aa11.2□□□□□ -0.62
BRF1-204ENST00000392557 PPP4R1Q8TF05 950 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms