RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 DSG3P32926 999 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 CRADDP78560 199 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 MAPK11Q15759 364 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 AGKQ53H12 422 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 ITPRIPL1Q6GPH6 555 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 PHF13Q86YI8 300 aaPredicted RBP14.66□□□□□ -0.06
RTF1-201ENST00000389629 C12orf56Q8IXR9 622 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 POLIQ9UNA4 740 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 WDR27A2RRH5 827 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 MAP3K13O43283 966 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 SERPINA6P08185 405 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 HSPA1AP0DMV8 641 aaKnown RBP14.66□□□□□ -0.06
RTF1-201ENST00000389629 HSPA1BP0DMV9 641 aaKnown RBP14.66□□□□□ -0.06
RTF1-201ENST00000389629 CETPP11597 493 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 PAMP19021 973 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 TGM2P21980 687 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 SERPINB10P48595 397 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 ARL13BQ3SXY8 428 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 FNBP1LQ5T0N5 605 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 ARMCX2Q7L311 632 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 KRT27Q7Z3Y8 459 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 ZNF554Q86TJ5 538 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 HPDLQ96IR7 371 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 TEX13BQ9BXU2 312 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 NDEL1Q9GZM8 345 aa14.66□□□□□ -0.06
RTF1-201ENST00000389629 WRAP73Q9P2S5 460 aaPredicted RBP14.66□□□□□ -0.06
RTF1-201ENST00000389629 FDX1P10109 184 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 MXD4Q14582 209 aaPredicted RBP14.65□□□□□ -0.06
RTF1-201ENST00000389629 ZACNQ401N2 412 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 FUT11Q495W5 492 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 RALGPS1Q5JS13 557 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 LRRC38Q5VT99 294 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 CHADLQ6NUI6 762 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 CATSPER4Q7RTX7 472 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 HEATR4Q86WZ0 1026 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 TTLL6Q8N841 843 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 DNAAF2Q9NVR5 837 aaKnown RBP14.65□□□□□ -0.06
RTF1-201ENST00000389629 H0Y626 953 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 TRIM16O95361 564 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 COX4I1P13073 169 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 SULT1E1P49888 294 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 CCR3P51677 355 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 ANKRD22Q5VYY1 191 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 CCDC81Q6ZN84 652 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 UTS2BQ765I0 119 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 OR5B17Q8NGF7 314 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 RSL24D1Q9UHA3 163 aaKnown RBP14.65□□□□□ -0.06
RTF1-201ENST00000389629 STAP1Q9ULZ2 295 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 C16orf96A6NNT2 1141 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 F8W8V4 182 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 PTPN11Q06124 597 aaPredicted RBP14.65□□□□□ -0.06
RTF1-201ENST00000389629 MMRN1Q13201 1228 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 TMEM132DQ14C87 1099 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 DENND1BQ6P3S1 775 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 AAGABQ6PD74 315 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 ZC3H3Q8IXZ2 948 aaKnown RBP14.65□□□□□ -0.06
RTF1-201ENST00000389629 PDCD6IPQ8WUM4 868 aaKnown RBP14.65□□□□□ -0.06
RTF1-201ENST00000389629 TFB1MQ8WVM0 346 aaKnown RBP14.65□□□□□ -0.06
RTF1-201ENST00000389629 SPATA33Q96N06 139 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 MBOAT7Q96N66 472 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 EML4Q9HC35 981 aaKnown RBP14.65□□□□□ -0.06
RTF1-201ENST00000389629 TSR3Q9UJK0 312 aaKnown RBP14.65□□□□□ -0.06
RTF1-201ENST00000389629 RGPD5Q99666 1765 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 BCL10O95999 233 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 INPP1P49441 399 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 VPS72Q15906 364 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 FAM182AQ5T1J6 154 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 AMIGO2Q86SJ2 522 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 PLD3Q8IV08 490 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 WDR49Q8IV35 697 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 MRPS26Q9BYN8 205 aaKnown RBP14.65□□□□□ -0.06
RTF1-201ENST00000389629 BRD8Q9H0E9 1235 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 SIK2Q9H0K1 926 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 PNPOQ9NVS9 261 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 ARHGEF38Q9NXL2 777 aa14.65□□□□□ -0.06
RTF1-201ENST00000389629 RUVBL2Q9Y230 463 aaKnown RBP14.65□□□□□ -0.06
RTF1-201ENST00000389629 SUPT20HL2P0C7V6 817 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 PSMA4P25789 261 aaKnown RBP14.64□□□□□ -0.07
RTF1-201ENST00000389629 RBP5P82980 135 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 SUPT20HL1Q3ZLR7 823 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 ZFP1Q6P2D0 407 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 FBXW8Q8N3Y1 598 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 SEPT1Q8WYJ6 367 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 ITFG2Q969R8 447 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 NWD2Q9ULI1 1742 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 CLOCKO15516 846 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 MAGEC1O60732 1142 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 ITGA2BP08514 1039 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 PLIN5Q00G26 463 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 GLRA4Q5JXX5 417 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 TBCELQ5QJ74 424 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 C6orf52Q5T4I8 152 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 PQLC1Q8N2U9 271 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 ZC3H15Q8WU90 426 aaKnown RBP14.64□□□□□ -0.07
RTF1-201ENST00000389629 DCUN1D1Q96GG9 259 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 MFSD14AQ96MC6 490 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 PIF1Q9H611 641 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 PPM1HQ9ULR3 514 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 TMEM191CA6NGB0 347 aa14.64□□□□□ -0.07
RTF1-201ENST00000389629 TRMUO75648 421 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms