RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 IL33O95760 270 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 TBX6O95947 436 aaPredicted RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 PRSS2P07478 247 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 UMODP07911 640 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 SP1P08047 785 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 SLC3A2P08195 630 aaKnown RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 VIL1P09327 827 aaKnown RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 TMIGD3P0DMS9 266 aaPredicted RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 TMEM225BP0DP42 221 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 HSD3B2P26439 372 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 KLRC1P26715 233 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 RECQLP46063 649 aaPredicted RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 PTDSS1P48651 473 aaKnown RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 AGFG1P52594 562 aaKnown RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 DLX5P56178 289 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 KRTAP10-3P60369 221 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 EIF4A1P60842 406 aaKnown RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 KRT85P78386 507 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 ROR2Q01974 943 aaKnown RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 POU3F1Q03052 451 aaPredicted RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 POU5F1BQ06416 359 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 TROAPQ12815 778 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 COASYQ13057 564 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 GPS2Q13227 327 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 RAB32Q13637 225 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 FGL2Q14314 439 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 FAM50AQ14320 339 aaKnown RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 SLC39A14Q15043 492 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 PWP2Q15269 919 aaKnown RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 CNGA3Q16281 694 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 ST3GAL2Q16842 350 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 INSCQ1MX18 579 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 ZNF672Q499Z4 452 aaPredicted RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 LIPMQ5VYY2 423 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 HIST2H2BCQ6DN03 193 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 GRHL2Q6ISB3 625 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 SWSAP1Q6NVH7 229 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 DHRS13Q6UX07 377 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 LIN28BQ6ZN17 250 aaKnown RBP eCLIP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 USP49Q70CQ1 688 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 C16orf82Q7Z2V1 217 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 ARMC9Q7Z3E5 817 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 NECAB2Q7Z6G3 386 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 NOP9Q86U38 636 aaKnown RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 GRAMD1CQ8IYS0 662 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 CHPFQ8IZ52 775 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 MUC20Q8N307 709 aaPredicted RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 FSTL5Q8N475 847 aaPredicted RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 ARL14EPQ8N8R7 260 aaPredicted RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 C7orf57Q8NEG2 295 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 OR56A3Q8NH54 315 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 SPSB4Q96A44 273 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 MVB12AQ96EY5 273 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 MRGPRX1Q96LB2 322 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 NT5C1BQ96P26 610 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 HIST1H2AAQ96QV6 131 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 NODALQ96S42 347 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 MAP3K14Q99558 947 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 EPYCQ99645 322 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 CGRRF1Q99675 332 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 SMAD5Q99717 465 aaKnown RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 HTATIP2Q9BUP3 242 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 TTLL2Q9BWV7 592 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 C1QTNF4Q9BXJ3 329 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 STK31Q9BXU1 1019 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 TRIM54Q9BYV2 358 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 SPRY4Q9C004 299 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 EGLN1Q9GZT9 426 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 TASP1Q9H6P5 420 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 SAP30LQ9HAJ7 183 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 SDF2L1Q9HCN8 221 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 XPNPEP3Q9NQH7 507 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 SACM1LQ9NTJ5 587 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 SEMA5BQ9P283 1151 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 PLEKHB1Q9UF11 243 aaPredicted RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 STEAP1Q9UHE8 339 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 KCNG2Q9UJ96 466 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 HDAC9Q9UKV0 1011 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 LAMP3Q9UQV4 416 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 STXBP5LQ9Y2K9 1186 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 SLC27A6Q9Y2P4 619 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 ATP8A1Q9Y2Q0 1164 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 TBX22Q9Y458 520 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 MMP24Q9Y5R2 645 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 TP53BP1Q12888 1972 aaPredicted RBP0.67□□□□□ -2.3
SNORD28-201ENST00000384706 A0A088AWK7 358 aa0.67□□□□□ -2.3
SNORD28-201ENST00000384706 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP0.67□□□□□ -2.3
SNORD28-201ENST00000384706 A0A1B0GVY2 172 aa0.67□□□□□ -2.3
SNORD28-201ENST00000384706 PYCARD-AS1I3L0S3 204 aa0.67□□□□□ -2.3
SNORD28-201ENST00000384706 RHODO00212 210 aa0.67□□□□□ -2.3
SNORD28-201ENST00000384706 PRYO14603 147 aa0.67□□□□□ -2.3
SNORD28-201ENST00000384706 BUB3O43684 328 aa0.67□□□□□ -2.3
SNORD28-201ENST00000384706 RRP9O43818 475 aaKnown RBP0.67□□□□□ -2.3
SNORD28-201ENST00000384706 NFATC1O95644 943 aa0.67□□□□□ -2.3
SNORD28-201ENST00000384706 PPP1R3DO95685 299 aa0.67□□□□□ -2.3
SNORD28-201ENST00000384706 MAP4K4O95819 1239 aaPredicted RBP0.67□□□□□ -2.3
SNORD28-201ENST00000384706 GLUD1P00367 558 aa0.67□□□□□ -2.3
SNORD28-201ENST00000384706 LDLRP01130 860 aa0.67□□□□□ -2.3
SNORD28-201ENST00000384706 IFNA2P01563 188 aa0.67□□□□□ -2.3
SNORD28-201ENST00000384706 MBPP02686 304 aaPredicted RBP0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms