RNA–Protein interactions for RNA: ENST00000384578.1

RNU6-878P-201, Transcript of RNA, U6 small nuclear 878, pseudogene, humanhuman

BASIC

Gene RNU6-878P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-878P-201ENST00000384578 STX16-NPEPL1H3BU86 382 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 STX16O14662 325 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 TIMM44O43615 452 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 DDX58O95786 925 aaKnown RBP4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 TFRCP02786 760 aaKnown RBP4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 HSP90AA1P07900 732 aaKnown RBP4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 GATA3P23771 443 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 LMO1P25800 156 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 SERPINA4P29622 427 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 HLXQ14774 488 aaPredicted RBP4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 ACOX1Q15067 660 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 TOMM20Q15388 145 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 CCDC30Q5VVM6 783 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 ICE2Q659A1 982 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 MICALCLQ6ZW33 695 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 SYT13Q7L8C5 426 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 TRABD2AQ86V40 505 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 ABRAQ8N0Z2 381 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 LRRC71Q8N4P6 559 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 C11orf44Q8N8P7 122 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 RFFLQ8WZ73 363 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 ST8SIA4Q92187 359 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 CPT1BQ92523 772 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 RNF31Q96EP0 1072 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 OSBPL9Q96SU4 736 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 CHCHD6Q9BRQ6 235 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 C17orf80Q9BSJ5 609 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 UNKLQ9H9P5 680 aaKnown RBP4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 CLIC5Q9NZA1 410 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 AASSQ9UDR5 926 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 KCNE5Q9UJ90 142 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 RRP7AQ9Y3A4 280 aaKnown RBP4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 COX11Q9Y6N1 276 aa4.33□□□□□ -1.72
RNU6-878P-201ENST00000384578 MAST3O60307 1309 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 A0A087X0M5 115 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 A0A1B0GX30 115 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 GXYLT2A0PJZ3 443 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 VWA3AA6NCI4 1184 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 MYADML2A6NDP7 307 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 F5H0A9 414 aaPredicted RBP4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 VNN1O95497 513 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 HNRNPA1P09651 372 aaKnown RBP eCLIP4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 YY1P25490 414 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 EPHA3P29320 983 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 PBX1P40424 430 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 CCT4P50991 539 aaKnown RBP4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 PDE6CP51160 858 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 RBM5P52756 815 aaKnown RBP eCLIP4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 CASP6P55212 293 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 TIRAPP58753 221 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 DCAF7P61962 342 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 RPS7P62081 194 aaKnown RBP4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 CXADRP78310 365 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 FPGSQ05932 587 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 SF3A3Q12874 501 aaKnown RBP eCLIP4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 MPP3Q13368 585 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 PDCLQ13371 301 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 TUBB3Q13509 450 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 CSHL1Q14406 222 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 CLCA4Q14CN2 919 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 RPS6KA2Q15349 733 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 CYP2A13Q16696 494 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 GEN1Q17RS7 908 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 SLC45A4Q5BKX6 768 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 TMEM196Q5HYL7 178 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 ZNF484Q5JVG2 852 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 DEPDC1Q5TB30 811 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 ATG16L1Q676U5 607 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 SFRP4Q6FHJ7 346 aaPredicted RBP4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 ACAD10Q6JQN1 1059 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 FOXR2Q6PJQ5 311 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 DSTYKQ6XUX3 929 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 KRBA2Q6ZNG9 492 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 C4orf50Q6ZRC1 276 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 RASGRP2Q7LDG7 609 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 IZUMO1Q8IYV9 350 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 TCP11L2Q8N4U5 519 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 UCMAQ8WVF2 138 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 HMGB4Q8WW32 186 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 ATG4AQ8WYN0 398 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 ZUFSPQ96AP4 578 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 TMEM125Q96AQ2 219 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 BARD1Q99728 777 aaKnown RBP4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 PAAF1Q9BRP4 392 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 VN1R3Q9BXE9 311 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 AMBRA1Q9C0C7 1298 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 PLEKHA5Q9HAU0 1116 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 ADARB2Q9NS39 739 aaKnown RBP4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 TESQ9UGI8 421 aaKnown RBP4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 AFG3L2Q9Y4W6 797 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 CYP46A1Q9Y6A2 500 aa4.32□□□□□ -1.72
RNU6-878P-201ENST00000384578 LMTK3Q96Q04 1460 aa4.31□□□□□ -1.72
RNU6-878P-201ENST00000384578 LOC105369274A0A096LPK9 316 aa4.31□□□□□ -1.72
RNU6-878P-201ENST00000384578 LOC102723532A0A0G2JNH3 316 aa4.31□□□□□ -1.72
RNU6-878P-201ENST00000384578 A0A1W2PPH5 198 aa4.31□□□□□ -1.72
RNU6-878P-201ENST00000384578 SLC38A8A6NNN8 435 aa4.31□□□□□ -1.72
RNU6-878P-201ENST00000384578 M0QYT0 321 aa4.31□□□□□ -1.72
RNU6-878P-201ENST00000384578 M0QZQ0 153 aa4.31□□□□□ -1.72
RNU6-878P-201ENST00000384578 PPM1DO15297 605 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms