RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 DUSP16Q9BY84 665 aa16.79■□□□□ 0.28
VCX3A-201ENST00000381089 MKRN2Q9H000 416 aaKnown RBP16.79■□□□□ 0.28
VCX3A-201ENST00000381089 MAPK13O15264 365 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 TIMM44O43615 452 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 SLFN14P0C7P3 912 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 KRT13P13646 458 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 CD58P19256 250 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 CORO1AP31146 461 aaKnown RBP16.78■□□□□ 0.28
VCX3A-201ENST00000381089 VAMP7P51809 220 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 SLC8A3P57103 927 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 EFEMP1Q12805 493 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 GEN1Q17RS7 908 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 ATL3Q6DD88 541 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 CCNI2Q6ZMN8 369 aaPredicted RBP16.78■□□□□ 0.28
VCX3A-201ENST00000381089 INTS8Q75QN2 995 aaKnown RBP16.78■□□□□ 0.28
VCX3A-201ENST00000381089 RSRC2Q7L4I2 434 aaKnown RBP16.78■□□□□ 0.28
VCX3A-201ENST00000381089 GRAMD1CQ8IYS0 662 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 TTC39CQ8N584 583 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 PNPLA1Q8N8W4 532 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 KIAA0895Q8NCT3 520 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 CCDC47Q96A33 483 aaKnown RBP16.78■□□□□ 0.28
VCX3A-201ENST00000381089 TWNKQ96RR1 684 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 SLC2A11Q9BYW1 496 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 CIPCQ9C0C6 399 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 NIF3L1Q9GZT8 377 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 PCED1AQ9H1Q7 454 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 KCTD10Q9H3F6 313 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 GAREM1Q9H706 876 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 ELOVL2Q9NXB9 296 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 PCOLCE2Q9UKZ9 415 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 CFAP45Q9UL16 551 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 PCDHA7Q9UN72 937 aa16.78■□□□□ 0.28
VCX3A-201ENST00000381089 METTL12A8MUP2 240 aa16.77■□□□□ 0.28
VCX3A-201ENST00000381089 TAF4O00268 1085 aa16.77■□□□□ 0.28
VCX3A-201ENST00000381089 MYL1P05976 194 aa16.77■□□□□ 0.28
VCX3A-201ENST00000381089 EPHX1P07099 455 aa16.77■□□□□ 0.28
VCX3A-201ENST00000381089 HMBSP08397 361 aa16.77■□□□□ 0.28
VCX3A-201ENST00000381089 ENPP2Q13822 863 aa16.77■□□□□ 0.28
VCX3A-201ENST00000381089 ZNF234Q14588 700 aa16.77■□□□□ 0.28
VCX3A-201ENST00000381089 SUZ12Q15022 739 aaKnown RBP16.77■□□□□ 0.28
VCX3A-201ENST00000381089 FOXD4L6Q3SYB3 417 aaPredicted RBP16.77■□□□□ 0.28
VCX3A-201ENST00000381089 KMT5BQ4FZB7 885 aa16.77■□□□□ 0.28
VCX3A-201ENST00000381089 FOXD4L5Q5VV16 416 aaPredicted RBP16.77■□□□□ 0.28
VCX3A-201ENST00000381089 SERPINA13PQ6UXR4 307 aa16.77■□□□□ 0.28
VCX3A-201ENST00000381089 FOXD4L3Q6VB84 417 aaPredicted RBP16.77■□□□□ 0.28
VCX3A-201ENST00000381089 SCD5Q86SK9 330 aa16.77■□□□□ 0.28
VCX3A-201ENST00000381089 DDI1Q8WTU0 396 aa16.77■□□□□ 0.28
VCX3A-201ENST00000381089 FOXD4L4Q8WXT5 416 aaPredicted RBP16.77■□□□□ 0.28
VCX3A-201ENST00000381089 CDC6Q99741 560 aa16.77■□□□□ 0.28
VCX3A-201ENST00000381089 TM7SF3Q9NS93 570 aa16.77■□□□□ 0.28
VCX3A-201ENST00000381089 MARCH2Q9P0N8 246 aa16.77■□□□□ 0.28
VCX3A-201ENST00000381089 KIAA1522Q9P206 1035 aaPredicted RBP16.77■□□□□ 0.28
VCX3A-201ENST00000381089 SERTAD1Q9UHV2 236 aa16.77■□□□□ 0.28
VCX3A-201ENST00000381089 USP3Q9Y6I4 520 aa16.77■□□□□ 0.28
VCX3A-201ENST00000381089 FLRT2O43155 660 aa16.76■□□□□ 0.27
VCX3A-201ENST00000381089 KLRC4O43908 158 aa16.76■□□□□ 0.27
VCX3A-201ENST00000381089 CBFA2T3O75081 653 aa16.76■□□□□ 0.27
VCX3A-201ENST00000381089 CILPO75339 1184 aa16.76■□□□□ 0.27
VCX3A-201ENST00000381089 IGLV3-19P01714 112 aa16.76■□□□□ 0.27
VCX3A-201ENST00000381089 KLKB1P03952 638 aa16.76■□□□□ 0.27
VCX3A-201ENST00000381089 TEAD4Q15561 434 aa16.76■□□□□ 0.27
VCX3A-201ENST00000381089 PPP1R26Q5T8A7 1209 aaPredicted RBP16.76■□□□□ 0.27
VCX3A-201ENST00000381089 DENND1CQ8IV53 801 aa16.76■□□□□ 0.27
VCX3A-201ENST00000381089 CPXM2Q8N436 756 aa16.76■□□□□ 0.27
VCX3A-201ENST00000381089 ENGASEQ8NFI3 743 aa16.76■□□□□ 0.27
VCX3A-201ENST00000381089 SNX19Q92543 992 aa16.76■□□□□ 0.27
VCX3A-201ENST00000381089 PAGE5Q96GU1 130 aa16.76■□□□□ 0.27
VCX3A-201ENST00000381089 HEXIM2Q96MH2 286 aaKnown RBP16.76■□□□□ 0.27
VCX3A-201ENST00000381089 USP25Q9UHP3 1055 aa16.76■□□□□ 0.27
VCX3A-201ENST00000381089 EIF2B4Q9UI10 523 aaKnown RBP16.76■□□□□ 0.27
VCX3A-201ENST00000381089 AGO1Q9UL18 857 aaKnown RBP16.76■□□□□ 0.27
VCX3A-201ENST00000381089 GPSM3Q9Y4H4 160 aa16.76■□□□□ 0.27
VCX3A-201ENST00000381089 PCDHGB2Q9Y5G2 931 aa16.76■□□□□ 0.27
VCX3A-201ENST00000381089 FASNP49327 2511 aaKnown RBP16.75■□□□□ 0.27
VCX3A-201ENST00000381089 KCNJ18B7U540 433 aa16.75■□□□□ 0.27
VCX3A-201ENST00000381089 CAPNS1P04632 268 aa16.75■□□□□ 0.27
VCX3A-201ENST00000381089 HSP90AA1P07900 732 aaKnown RBP16.75■□□□□ 0.27
VCX3A-201ENST00000381089 NR2F2P24468 414 aa16.75■□□□□ 0.27
VCX3A-201ENST00000381089 RPL13P26373 211 aaKnown RBP16.75■□□□□ 0.27
VCX3A-201ENST00000381089 GCLMP48507 274 aa16.75■□□□□ 0.27
VCX3A-201ENST00000381089 AFF3P51826 1226 aaKnown RBP16.75■□□□□ 0.27
VCX3A-201ENST00000381089 ENPEPQ07075 957 aa16.75■□□□□ 0.27
VCX3A-201ENST00000381089 HLA-BQ31612 363 aa16.75■□□□□ 0.27
VCX3A-201ENST00000381089 TAS1R2Q8TE23 839 aa16.75■□□□□ 0.27
VCX3A-201ENST00000381089 RHBDD1Q8TEB9 315 aa16.75■□□□□ 0.27
VCX3A-201ENST00000381089 PLD4Q96BZ4 506 aa16.75■□□□□ 0.27
VCX3A-201ENST00000381089 PIWIL1Q96J94 861 aaKnown RBP16.75■□□□□ 0.27
VCX3A-201ENST00000381089 UBXN6Q9BZV1 441 aa16.75■□□□□ 0.27
VCX3A-201ENST00000381089 APOBEC3GQ9HC16 384 aaKnown RBP16.75■□□□□ 0.27
VCX3A-201ENST00000381089 TRAF3IP3Q9Y228 551 aa16.75■□□□□ 0.27
VCX3A-201ENST00000381089 ADAMTS20P59510 1910 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 SLC12A8A0AV02 714 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 ACTN4O43707 911 aaKnown RBP16.74■□□□□ 0.27
VCX3A-201ENST00000381089 F13A1P00488 732 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 ZSCAN22P10073 491 aaPredicted RBP16.74■□□□□ 0.27
VCX3A-201ENST00000381089 ANP32AP39687 249 aaKnown RBP16.74■□□□□ 0.27
VCX3A-201ENST00000381089 HARS2P49590 506 aaKnown RBP16.74■□□□□ 0.27
VCX3A-201ENST00000381089 COPAP53621 1224 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 ZNF445P59923 1031 aa16.74■□□□□ 0.27
VCX3A-201ENST00000381089 YWHAGP61981 247 aaKnown RBP eCLIP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms