RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 MCRS1Q96EZ8 462 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 SPATS2LQ9NUQ6 558 aaKnown RBP16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 CPA4Q9UI42 421 aa16.83■□□□□ 0.28
NKX3-1-201ENST00000380871 SMAPO00193 183 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 ADORA2BP29275 332 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 KRT81Q14533 505 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 GOLGA7BQ2TAP0 167 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 FAM183BPQ6ZVS7 135 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 PQLC3Q8N755 202 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 TSC22D3Q99576 134 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 MRPL45Q9BRJ2 306 aaKnown RBP16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 C16orf70Q9BSU1 422 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 SYNJ2BP-COX16A0A087WUM0 186 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 CHADO15335 359 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 TSPAN1O60635 241 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 CILPO75339 1184 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 LYPLA1O75608 230 aaPredicted RBP16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 STIP1P31948 543 aaKnown RBP16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 IRGCQ6NXR0 463 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 C16orf46Q6P387 395 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 NUDCD3Q8IVD9 361 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 NDUFAF2Q8N183 169 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 BRI3BPQ8WY22 251 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 RNF157Q96PX1 679 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 TTC1Q99614 292 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 COX16Q9P0S2 106 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 TUBGCP4Q9UGJ1 667 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 C2CD2Q9Y426 696 aa16.82■□□□□ 0.28
NKX3-1-201ENST00000380871 SLC15A5A6NIM6 579 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 KRT37O76014 449 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 SORBS2O94875 1100 aaKnown RBP16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 MCF2P10911 925 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 TFE3P19532 575 aaPredicted RBP16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 ZNF143P52747 638 aaPredicted RBP16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 CRADDP78560 199 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 AP1B1Q10567 949 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 GRM1Q13255 1194 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 USP50Q70EL3 339 aaPredicted RBP16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 CCNJLQ8IV13 435 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 SMC1BQ8NDV3 1235 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 UPF1Q92900 1129 aaKnown RBP eCLIP16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 RILPQ96NA2 401 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 TUBB6Q9BUF5 446 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 BCO2Q9BYV7 579 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 SLC7A8Q9UHI5 535 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 ADCY6O43306 1168 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 METTL18O95568 372 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 SKIP12755 728 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 TNFAIP2Q03169 654 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 ULK2Q8IYT8 1036 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 PCDH19Q8TAB3 1148 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 SHCBP1LQ9BZQ2 653 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 GOLGA2P5Q9HBQ8 144 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 ETNK2Q9NVF9 386 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 ASNSD1Q9NWL6 643 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 KCNK4Q9NYG8 393 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 PPM1HQ9ULR3 514 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 PLA2G4CQ9UP65 541 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 C2CD4BA6NLJ0 364 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 PRPSAP2O60256 369 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 ENDOD1O94919 500 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 ZBED1O96006 694 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 P4HA1P13674 534 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 TSHRP16473 764 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 GPD1P21695 349 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 RBP5P82980 135 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 ZNF792Q3KQV3 632 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 PPP1R26Q5T8A7 1209 aaPredicted RBP16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 MAMDC4Q6UXC1 1216 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 CFAP61Q8NHU2 1237 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 ZMAT2Q96NC0 199 aaKnown RBP16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 MMADHCQ9H3L0 296 aaPredicted RBP16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 SIRPGQ9P1W8 387 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 CACNG4Q9UBN1 327 aa16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 HBS1LQ9Y450 684 aaKnown RBP16.81■□□□□ 0.28
NKX3-1-201ENST00000380871 KLF11O14901 512 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 MAP3K7O43318 606 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 BAG2O95816 211 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 ZCCHC18P0CG32 403 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 LBRQ14739 615 aaKnown RBP16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 ZNF534Q76KX8 674 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 GPR142Q7Z601 462 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 SCUBE1Q8IWY4 988 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 POU5F2Q8N7G0 328 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 ZNF184Q99676 751 aaPredicted RBP16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 ASB3Q9Y575 518 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 ANK1P16157 1881 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 E2F8A0AVK6 867 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 ITM2AO43736 263 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 ATXN1P54253 815 aaKnown RBP16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 CACNA2D1P54289 1103 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 SATB1Q01826 763 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 NPLOC4Q8TAT6 608 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 C7orf26Q96N11 449 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 NXF3Q9H4D5 531 aaKnown RBP16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 IL1RAPL1Q9NZN1 696 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 DNAH12Q6ZR08 3092 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 APOEP02649 317 aa16.8■□□□□ 0.28
NKX3-1-201ENST00000380871 BCAR1P56945 870 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms