RNA–Protein interactions for RNA: ENST00000380850.8

TTC39B-202, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-202ENST00000380850 DDX43Q9NXZ2 648 aaKnown RBP13.13□□□□□ -0.31
TTC39B-202ENST00000380850 NKX1-2Q9UD57 310 aaPredicted RBP13.13□□□□□ -0.31
TTC39B-202ENST00000380850 C5orf60A6NFR6 353 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 YJEFN3A6XGL0 299 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 E7ENQ6 273 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 MDM4O15151 490 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 BAG2O95816 211 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 EZRP15311 586 aaKnown RBP13.13□□□□□ -0.31
TTC39B-202ENST00000380850 MAP2K2P36507 400 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 CLCNKBP51801 687 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 ARFIP2P53365 341 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 EPHB1P54762 984 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 DEUP1Q05D60 604 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 ITKQ08881 620 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 MFSD10Q14728 455 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 NOTUMQ6P988 496 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 SLC27A1Q6PCB7 646 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 OLFML1Q6UWY5 402 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 MAMDC4Q6UXC1 1216 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 UNC5AQ6ZN44 842 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 SYDE1Q6ZW31 735 aaPredicted RBP13.13□□□□□ -0.31
TTC39B-202ENST00000380850 SCAMP5Q8TAC9 235 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 NAT14Q8WUY8 206 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 NKD2Q969F2 451 aaPredicted RBP13.13□□□□□ -0.31
TTC39B-202ENST00000380850 GBA2Q9HCG7 927 aaPredicted RBP13.13□□□□□ -0.31
TTC39B-202ENST00000380850 NMRK2Q9NPI5 230 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 ARL8BQ9NVJ2 186 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 PCDHGC3Q9UN70 934 aa13.13□□□□□ -0.31
TTC39B-202ENST00000380850 MAGEB2O15479 319 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 DGKIO75912 1065 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 VAV1P15498 845 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 SEPT6Q14141 434 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 SNX17Q15036 470 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 MTFR1Q15390 333 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 WNT8BQ93098 351 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 ZNF669Q96BR6 464 aaPredicted RBP13.12□□□□□ -0.31
TTC39B-202ENST00000380850 MCRS1Q96EZ8 462 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 TMEM120AQ9BXJ8 343 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 AP5M1Q9H0R1 490 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 TMEM30AQ9NV96 361 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 MIOSQ9NXC5 875 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 SHOC2Q9UQ13 582 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 IPPQ9Y573 584 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 RNF103O00237 685 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 TNPO2O14787 897 aaKnown RBP13.12□□□□□ -0.31
TTC39B-202ENST00000380850 ANP32DO95626 131 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 ALDH3A1P30838 453 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 UBAP2LQ14157 1087 aaKnown RBP13.12□□□□□ -0.31
TTC39B-202ENST00000380850 ZNF460Q14592 562 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 PCGF5Q86SE9 256 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 NUDCD3Q8IVD9 361 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 EXT2Q93063 718 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 MARK4Q96L34 752 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 CSPG4P5Q96PW8 444 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 EBF4Q9BQW3 602 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 SFMBT1Q9UHJ3 866 aa13.12□□□□□ -0.31
TTC39B-202ENST00000380850 H3BRJ5 948 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 CHUKO15111 745 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 JCHAINP01591 159 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 TROVE2P10155 538 aaKnown RBP eCLIP13.11□□□□□ -0.31
TTC39B-202ENST00000380850 NCF2P19878 526 aaPredicted RBP13.11□□□□□ -0.31
TTC39B-202ENST00000380850 TFAP2DQ7Z6R9 452 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 SPATS2Q86XZ4 545 aaKnown RBP13.11□□□□□ -0.31
TTC39B-202ENST00000380850 PPTC7Q8NI37 304 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 MCUR1Q96AQ8 359 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 AGAP2Q99490 1192 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 PPP1R12CQ9BZL4 782 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 ANLNQ9NQW6 1124 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 CNTN6Q9UQ52 1028 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 RPS6KL1Q9Y6S9 549 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 ELNP15502 786 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 THPOP40225 353 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 ZNF792Q3KQV3 632 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 CERCAMQ5T4B2 595 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 ZNF280DQ6N043 979 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 LCLAT1Q6UWP7 414 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 CYP4V2Q6ZWL3 525 aaPredicted RBP13.11□□□□□ -0.31
TTC39B-202ENST00000380850 RNF148Q8N7C7 305 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 TTC13Q8NBP0 860 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 CMASQ8NFW8 434 aaPredicted RBP13.11□□□□□ -0.31
TTC39B-202ENST00000380850 SPATA22Q8NHS9 363 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 DCAKDQ8WVC6 231 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 ASB7Q9H672 318 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 USP29Q9HBJ7 922 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 DTLQ9NZJ0 730 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.11□□□□□ -0.31
TTC39B-202ENST00000380850 PMPCBO75439 489 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 DESP17661 470 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 PEX19P40855 299 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 SERPINB4P48594 390 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 BST1Q10588 318 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 HSP90AA5PQ58FG0 334 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 FBXO48Q5FWF7 155 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 CAND1Q86VP6 1230 aaKnown RBP13.11□□□□□ -0.31
TTC39B-202ENST00000380850 MICAL1Q8TDZ2 1067 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 ZNF778Q96MU6 729 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 TTC25Q96NG3 672 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 OXCT2Q9BYC2 517 aaPredicted RBP13.11□□□□□ -0.31
TTC39B-202ENST00000380850 KDM4CQ9H3R0 1056 aa13.11□□□□□ -0.31
TTC39B-202ENST00000380850 PIGVQ9NUD9 493 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms