RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 PDE4CQ08493 712 aa17.66■□□□□ 0.42
SMN2-201ENST00000380741 COBLL1Q53SF7 1204 aa17.66■□□□□ 0.42
SMN2-201ENST00000380741 ANKRD40Q6AI12 368 aa17.66■□□□□ 0.42
SMN2-201ENST00000380741 PM20D1Q6GTS8 502 aa17.66■□□□□ 0.42
SMN2-201ENST00000380741 KIAA1324Q6UXG2 1013 aaKnown RBP17.66■□□□□ 0.42
SMN2-201ENST00000380741 BHLHA9Q7RTU4 235 aa17.66■□□□□ 0.42
SMN2-201ENST00000380741 TRIML1Q8N9V2 468 aa17.66■□□□□ 0.42
SMN2-201ENST00000380741 NDRG1Q92597 394 aaKnown RBP17.66■□□□□ 0.42
SMN2-201ENST00000380741 ERCC4Q92889 916 aaPredicted RBP17.66■□□□□ 0.42
SMN2-201ENST00000380741 HSPA12BQ96MM6 686 aa17.66■□□□□ 0.42
SMN2-201ENST00000380741 GTPBP2Q9BX10 602 aaKnown RBP17.66■□□□□ 0.42
SMN2-201ENST00000380741 ULBP1Q9BZM6 244 aa17.66■□□□□ 0.42
SMN2-201ENST00000380741 CAPN10Q9HC96 672 aa17.66■□□□□ 0.42
SMN2-201ENST00000380741 CLEC4EQ9ULY5 219 aa17.66■□□□□ 0.42
SMN2-201ENST00000380741 WASF3Q9UPY6 502 aa17.66■□□□□ 0.42
SMN2-201ENST00000380741 TRIM49BA6NDI0 452 aa17.65■□□□□ 0.42
SMN2-201ENST00000380741 XPO1O14980 1071 aaKnown RBP17.65■□□□□ 0.42
SMN2-201ENST00000380741 SERPINF2P08697 491 aa17.65■□□□□ 0.42
SMN2-201ENST00000380741 IL12RB1P42701 662 aa17.65■□□□□ 0.42
SMN2-201ENST00000380741 ATXN3P54252 364 aaPredicted RBP17.65■□□□□ 0.42
SMN2-201ENST00000380741 BCAT1P54687 386 aa17.65■□□□□ 0.42
SMN2-201ENST00000380741 FKBP3Q00688 224 aaKnown RBP17.65■□□□□ 0.42
SMN2-201ENST00000380741 GFPT1Q06210 699 aaPredicted RBP17.65■□□□□ 0.42
SMN2-201ENST00000380741 STARD3Q14849 445 aa17.65■□□□□ 0.42
SMN2-201ENST00000380741 FUT11Q495W5 492 aa17.65■□□□□ 0.42
SMN2-201ENST00000380741 SGO2Q562F6 1265 aa17.65■□□□□ 0.42
SMN2-201ENST00000380741 ANKS1BQ7Z6G8 1248 aa17.65■□□□□ 0.42
SMN2-201ENST00000380741 RABEPKQ7Z6M1 372 aa17.65■□□□□ 0.42
SMN2-201ENST00000380741 CPXM2Q8N436 756 aa17.65■□□□□ 0.42
SMN2-201ENST00000380741 SLC35C1Q96A29 364 aa17.65■□□□□ 0.42
SMN2-201ENST00000380741 PIWIL1Q96J94 861 aaKnown RBP17.65■□□□□ 0.42
SMN2-201ENST00000380741 GSDMAQ96QA5 445 aa17.65■□□□□ 0.42
SMN2-201ENST00000380741 THAP10Q9P2Z0 257 aaPredicted RBP17.65■□□□□ 0.42
SMN2-201ENST00000380741 AKAP13Q12802 2813 aa17.65■□□□□ 0.42
SMN2-201ENST00000380741 CHD6Q8TD26 2715 aa17.64■□□□□ 0.42
SMN2-201ENST00000380741 IGF2RP11717 2491 aa17.64■□□□□ 0.42
SMN2-201ENST00000380741 NDUFS2O75306 463 aa17.64■□□□□ 0.41
SMN2-201ENST00000380741 TOP3BO95985 862 aaKnown RBP17.64■□□□□ 0.41
SMN2-201ENST00000380741 CYBBP04839 570 aa17.64■□□□□ 0.41
SMN2-201ENST00000380741 CD19P15391 556 aa17.64■□□□□ 0.41
SMN2-201ENST00000380741 SPINK2P20155 84 aa17.64■□□□□ 0.41
SMN2-201ENST00000380741 ADIGQ0VDE8 80 aa17.64■□□□□ 0.41
SMN2-201ENST00000380741 BST2Q10589 180 aaKnown RBP17.64■□□□□ 0.41
SMN2-201ENST00000380741 ENPP2Q13822 863 aa17.64■□□□□ 0.41
SMN2-201ENST00000380741 FMNL3Q8IVF7 1028 aa17.64■□□□□ 0.41
SMN2-201ENST00000380741 FAM217AQ8IXS0 508 aa17.64■□□□□ 0.41
SMN2-201ENST00000380741 UBR7Q8N806 425 aa17.64■□□□□ 0.41
SMN2-201ENST00000380741 ENGASEQ8NFI3 743 aa17.64■□□□□ 0.41
SMN2-201ENST00000380741 DDI1Q8WTU0 396 aa17.64■□□□□ 0.41
SMN2-201ENST00000380741 PLD4Q96BZ4 506 aa17.64■□□□□ 0.41
SMN2-201ENST00000380741 ZNF419Q96HQ0 510 aaPredicted RBP17.64■□□□□ 0.41
SMN2-201ENST00000380741 MKRN2Q9H000 416 aaKnown RBP17.64■□□□□ 0.41
SMN2-201ENST00000380741 SLC32A1Q9H598 525 aa17.64■□□□□ 0.41
SMN2-201ENST00000380741 LRRC4Q9HBW1 653 aa17.64■□□□□ 0.41
SMN2-201ENST00000380741 HESX1Q9UBX0 185 aa17.64■□□□□ 0.41
SMN2-201ENST00000380741 ARMCX3Q9UH62 379 aaPredicted RBP17.64■□□□□ 0.41
SMN2-201ENST00000380741 NPC1O15118 1278 aa17.63■□□□□ 0.41
SMN2-201ENST00000380741 YWHAEP62258 255 aaKnown RBP17.63■□□□□ 0.41
SMN2-201ENST00000380741 LRRC63Q05C16 580 aa17.63■□□□□ 0.41
SMN2-201ENST00000380741 LRMPQ12912 555 aa17.63■□□□□ 0.41
SMN2-201ENST00000380741 SEMA3BQ13214 749 aa17.63■□□□□ 0.41
SMN2-201ENST00000380741 TRIP4Q15650 581 aaPredicted RBP17.63■□□□□ 0.41
SMN2-201ENST00000380741 PIP4P1Q86T03 277 aa17.63■□□□□ 0.41
SMN2-201ENST00000380741 RGL4Q8IZJ4 473 aa17.63■□□□□ 0.41
SMN2-201ENST00000380741 HDDC3Q8N4P3 179 aa17.63■□□□□ 0.41
SMN2-201ENST00000380741 MINDY1Q8N5J2 469 aa17.63■□□□□ 0.41
SMN2-201ENST00000380741 OR2I1PQ8NGU4 316 aa17.63■□□□□ 0.41
SMN2-201ENST00000380741 SPATA20Q8TB22 786 aa17.63■□□□□ 0.41
SMN2-201ENST00000380741 UBA3Q8TBC4 463 aa17.63■□□□□ 0.41
SMN2-201ENST00000380741 UCMAQ8WVF2 138 aa17.63■□□□□ 0.41
SMN2-201ENST00000380741 SMARCE1Q969G3 411 aa17.63■□□□□ 0.41
SMN2-201ENST00000380741 IPO9Q96P70 1041 aaKnown RBP17.63■□□□□ 0.41
SMN2-201ENST00000380741 PRDM16Q9HAZ2 1276 aa17.63■□□□□ 0.41
SMN2-201ENST00000380741 OLA1Q9NTK5 396 aaKnown RBP17.63■□□□□ 0.41
SMN2-201ENST00000380741 ZZEF1O43149 2961 aa17.63■□□□□ 0.41
SMN2-201ENST00000380741 GOLGA6L4A6NEF3 574 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 YJEFN3A6XGL0 299 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 C1QTNF9BB2RNN3 333 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 E7ENQ6 273 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 O00370 1275 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 ARHGAP33O14559 1287 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 OPHN1O60890 802 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 SMC2O95347 1197 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 PROS1P07225 676 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 C1QTNF9P0C862 333 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 VDRP11473 427 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 CD6P30203 668 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 ZNF132P52740 706 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 ZNF234Q14588 700 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 BSPRYQ5W0U4 402 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 TMEM215Q68D42 235 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 UNQ6494/PRO21346Q6UXR6 183 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 METTL3Q86U44 580 aaKnown RBP17.62■□□□□ 0.41
SMN2-201ENST00000380741 SIX6OS1Q8N1H7 587 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 RBBP8NLQ8NC74 664 aaPredicted RBP17.62■□□□□ 0.41
SMN2-201ENST00000380741 SORCS1Q8WY21 1168 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 EDEM1Q92611 657 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 SLC2A11Q9BYW1 496 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 CIPCQ9C0C6 399 aa17.62■□□□□ 0.41
SMN2-201ENST00000380741 ELOVL2Q9NXB9 296 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms