RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 C2orf15Q8WU43 125 aaKnown RBP8.04□□□□□ -1.12
CDKL5-202ENST00000379996 MAIP1Q8WWC4 291 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 SENP8Q96LD8 212 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 FAM193BQ96PV7 902 aaPredicted RBP8.04□□□□□ -1.12
CDKL5-202ENST00000379996 SMYD3Q9H7B4 428 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 GOLGA2P5Q9HBQ8 144 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 ARHGEF3Q9NR81 526 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 POLIQ9UNA4 740 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 PCDHGA11Q9Y5H2 935 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 PCDHA11Q9Y5I1 949 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 USP3Q9Y6I4 520 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 SLC4A7Q9Y6M7 1214 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 ZNF638Q14966 1978 aaKnown RBP8.04□□□□□ -1.12
CDKL5-202ENST00000379996 CCDC85CA6NKD9 419 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 CYB561D2O14569 222 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 MED7O43513 233 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 HUS1O60921 280 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 ATP6V1G2O95670 118 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 C1QAP02745 245 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 ACRP10323 421 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 TAC1P20366 129 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 SLC25A11Q02978 314 aaKnown RBP8.04□□□□□ -1.12
CDKL5-202ENST00000379996 TXNRD3NBQ6F5E7 133 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 PRUNE1Q86TP1 453 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 ADGRF2Q8IZF7 708 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 GRK7Q8WTQ7 553 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 IGSF21Q96ID5 467 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 RMDN2Q96LZ7 410 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 NT5C1AQ9BXI3 368 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 NME7Q9Y5B8 376 aa8.04□□□□□ -1.12
CDKL5-202ENST00000379996 MRPL42Q9Y6G3 142 aaKnown RBP8.04□□□□□ -1.12
CDKL5-202ENST00000379996 DNALI1O14645 258 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 CHUKO15111 745 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 TYROBPO43914 113 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 ICMTO60725 284 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 RB1P06400 928 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 SETSIPP0DME0 302 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 USP8P40818 1118 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 MAGEA10P43363 369 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 RPL7AP62424 266 aaKnown RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 LSM11P83369 360 aaKnown RBP eCLIP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 ODF2Q5BJF6 829 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 RNF43Q68DV7 783 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 TMC7Q7Z402 723 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 TRABD2AQ86V40 505 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 RHOT1Q8IXI2 618 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 SCML4Q8N228 414 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 SLC35B2Q8TB61 432 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 ARHGEF2Q92974 986 aaKnown RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 NKD2Q969F2 451 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 TNIP3Q96KP6 325 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 MAGEB18Q96M61 343 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 ZNF558Q96NG5 402 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 RTP3Q9BQQ7 232 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 MRPL45Q9BRJ2 306 aaKnown RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 PAAF1Q9BRP4 392 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 OSBPL8Q9BZF1 889 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 FOXP3Q9BZS1 431 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 STMN4Q9H169 189 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 EBF2Q9HAK2 575 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 HOMER3Q9NSC5 361 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 DNAJB4Q9UDY4 337 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 DRG1Q9Y295 367 aaKnown RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 SSX2IPQ9Y2D8 614 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 NUMBLQ9Y6R0 609 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 hCG_1818297A0A087WSY0 165 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 CASTOR2A6NHX0 329 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 OR6C75A6NL08 312 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 ACSL3O95573 720 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 CDKN2BP42772 138 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 SNX1Q13596 522 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 MAPRE1Q15691 268 aaKnown RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 KYNUQ16719 465 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 RNF187Q5TA31 235 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 LCLAT1Q6UWP7 414 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 CYP4V2Q6ZWL3 525 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 TAOK1Q7L7X3 1001 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 RIBC1Q8N443 379 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 FITM2Q8N6M3 262 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 DPF3Q92784 378 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 UTP4Q969X6 686 aaKnown RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 ELOVL4Q9GZR5 314 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 ZCWPW1Q9H0M4 648 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 FNIP2Q9P278 1114 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 FETUBQ9UGM5 382 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 NAALADL1Q9UQQ1 740 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 USP15Q9Y4E8 981 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 PCDHB4Q9Y5E5 795 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 SNX9Q9Y5X1 595 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 CLUHO75153 1309 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 E7ESA3 106 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 H7C4K7 107 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 SOD2P04179 222 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 ATP2A2P16615 1042 aaKnown RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 PCSK1P29120 753 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 DNAJA1P31689 397 aaKnown RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 GATMP50440 423 aa8.03□□□□□ -1.12
CDKL5-202ENST00000379996 GTF2A1P52655 376 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 RNASELQ05823 741 aaKnown RBP8.03□□□□□ -1.12
CDKL5-202ENST00000379996 SH2D5Q6ZV89 423 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms