RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 TMPRSS15P98073 1019 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 CHI3L2Q15782 390 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 ZBTB6Q15916 424 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 DENND5BQ6ZUT9 1274 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 SLC26A9Q7LBE3 791 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 E2F7Q96AV8 911 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 VTA1Q9NP79 307 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 DTLQ9NZJ0 730 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 SIRPGQ9P1W8 387 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 PCDHA11Q9Y5I1 949 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 GSTA2P09210 222 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 PDGFRBP09619 1106 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 AMPD1P23109 780 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 OCRLQ01968 901 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 FASTKD5Q7L8L6 764 aaKnown RBP20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 KBTBD7Q8WVZ9 684 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 CDHR5Q9HBB8 845 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 USP3Q9Y6I4 520 aa20.17■□□□□ 0.82
SHROOM1-202ENST00000378676 RBM47A0AV96 593 aaKnown RBP20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 KRT38O76015 456 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 GOT1P17174 413 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 DESP17661 470 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 SEMA5AQ13591 1074 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 KRT72Q14CN4 511 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 NBPF20Q3BBV1 942 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 KHDC1Q4VXA5 237 aaKnown RBP20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 LGSNQ5TDP6 509 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 C9orf131Q5VYM1 1079 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 ZDHHC17Q8IUH5 632 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 EMID1Q96A84 441 aaPredicted RBP20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 C7orf26Q96N11 449 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 C20orf27Q9GZN8 174 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 RPL26L1Q9UNX3 145 aaKnown RBP20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 DERAQ9Y315 318 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 I3L4J1 428 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 LMO2P25791 158 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 BST2Q10589 180 aaKnown RBP20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 ZNF618Q5T7W0 954 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 C9orf57Q5W0N0 161 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 ZNF410Q86VK4 478 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 ARID3BQ8IVW6 561 aaPredicted RBP20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 NDUFAF2Q8N183 169 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 SH3TC2Q8TF17 1288 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 DEPDC1BQ8WUY9 529 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 FAM49AQ9H0Q0 323 aaPredicted RBP20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 NXF3Q9H4D5 531 aaKnown RBP20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 TAS2R1Q9NYW7 299 aa20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 MARCOQ9UEW3 520 aaPredicted RBP20.16■□□□□ 0.82
SHROOM1-202ENST00000378676 GYG2O15488 501 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 ABL2P42684 1182 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 CPA2P48052 419 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 CRADDP78560 199 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 HEATR6Q6AI08 1181 aaKnown RBP20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 C4orf22Q6V702 233 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 UNC93AQ86WB7 457 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 TREML1Q86YW5 311 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 LRRC52Q8N7C0 313 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 APOL6Q9BWW8 343 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 ADAMTS10Q9H324 1103 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 PLEKHA5Q9HAU0 1116 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 PIH1D1Q9NWS0 290 aaKnown RBP20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 TRIP12Q14669 1992 aaPredicted RBP20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 TSC2P49815 1807 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 ZNF236Q9UL36 1845 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 WDR27A2RRH5 827 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 ESRRAP11474 423 aaPredicted RBP20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 CALRP27797 417 aaKnown RBP20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 SLC27A1Q6PCB7 646 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 ZCCHC23Q6ZST2 131 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 NUDCD3Q8IVD9 361 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 BEST2Q8NFU1 509 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 NDRG1Q92597 394 aaKnown RBP20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 MTBPQ96DY7 904 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 NAF1Q96HR8 494 aaKnown RBP20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 OLFM3Q96PB7 478 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 TUBB6Q9BUF5 446 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 SETD4Q9NVD3 440 aa20.15■□□□□ 0.82
SHROOM1-202ENST00000378676 E7ENQ6 273 aa20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 KIF3CO14782 793 aa20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 SPTLC1O15269 473 aa20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 MFSD11O43934 449 aa20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 SNAI1O95863 264 aaPredicted RBP20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 MMP3P08254 477 aa20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 KITP10721 976 aa20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 ZFXP17010 805 aaPredicted RBP20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 PTDSS1P48651 473 aaKnown RBP20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 BCAT1P54687 386 aa20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 KPNB1Q14974 876 aaKnown RBP20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 FAM91A1Q658Y4 838 aa20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 CATSPER4Q7RTX7 472 aa20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 ADGRF2Q8IZF7 708 aa20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 ANKRD52Q8NB46 1076 aa20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 LGMNQ99538 433 aa20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 XAB2Q9HCS7 855 aaKnown RBP20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 TMPRSS4Q9NRS4 437 aa20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 KCNK4Q9NYG8 393 aa20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 GTF2IRD1Q9UHL9 959 aa20.14■□□□□ 0.82
SHROOM1-202ENST00000378676 DGKIO75912 1065 aa20.14■□□□□ 0.81
SHROOM1-202ENST00000378676 RECQL4O94761 1208 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms