RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 PRDM16Q9HAZ2 1276 aa18.33■□□□□ 0.52
CTTN-203ENST00000376561 ABCC13Q9NSE7 274 aa18.33■□□□□ 0.52
CTTN-203ENST00000376561 CFAP69A5D8W1 941 aa18.32■□□□□ 0.52
CTTN-203ENST00000376561 TRIM66O15016 1216 aa18.32■□□□□ 0.52
CTTN-203ENST00000376561 CREB3O43889 395 aa18.32■□□□□ 0.52
CTTN-203ENST00000376561 DGKIO75912 1065 aa18.32■□□□□ 0.52
CTTN-203ENST00000376561 AMHP03971 560 aa18.32■□□□□ 0.52
CTTN-203ENST00000376561 RBL1P28749 1068 aa18.32■□□□□ 0.52
CTTN-203ENST00000376561 MAGEA11P43364 429 aa18.32■□□□□ 0.52
CTTN-203ENST00000376561 CXCR3P49682 368 aa18.32■□□□□ 0.52
CTTN-203ENST00000376561 XRCC4Q13426 336 aa18.32■□□□□ 0.52
CTTN-203ENST00000376561 ARL13BQ3SXY8 428 aa18.32■□□□□ 0.52
CTTN-203ENST00000376561 SDHAF4Q5VUM1 108 aa18.32■□□□□ 0.52
CTTN-203ENST00000376561 RELL1Q8IUW5 271 aa18.32■□□□□ 0.52
CTTN-203ENST00000376561 FAM76AQ8TAV0 307 aa18.32■□□□□ 0.52
CTTN-203ENST00000376561 CPT1BQ92523 772 aa18.32■□□□□ 0.52
CTTN-203ENST00000376561 PRCCQ92733 491 aaPredicted RBP18.32■□□□□ 0.52
CTTN-203ENST00000376561 PAWRQ96IZ0 340 aaKnown RBP18.32■□□□□ 0.52
CTTN-203ENST00000376561 ATP6V1G3Q96LB4 118 aa18.32■□□□□ 0.52
CTTN-203ENST00000376561 RBM15Q96T37 977 aaKnown RBP eCLIP18.32■□□□□ 0.523e-7■■■■□ 20.8
CTTN-203ENST00000376561 DTLQ9NZJ0 730 aa18.32■□□□□ 0.52
CTTN-203ENST00000376561 MFHAS1Q9Y4C4 1052 aa18.32■□□□□ 0.52
CTTN-203ENST00000376561 KCNN4O15554 427 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 TBC1D4O60343 1298 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 GPR15P49685 360 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 ARPP19P56211 112 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 KRT71Q3SY84 523 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 BTBD8Q5XKL5 378 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 RSPO2Q6UXX9 243 aaPredicted RBP18.31■□□□□ 0.52
CTTN-203ENST00000376561 CEP128Q6ZU80 1094 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 TAS1R1Q7RTX1 841 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 SCD5Q86SK9 330 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 PPIL6Q8IXY8 311 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 NUP93Q8N1F7 819 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 SH2D3CQ8N5H7 860 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 RTP4Q96DX8 246 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 TTPALQ9BTX7 342 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 C11orf49Q9H6J7 331 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 LRRC4CQ9HCJ2 640 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 TTC4O95801 387 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 IGLV3-25P01717 112 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 CPB1P15086 417 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 RFC2P35250 354 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 ALDH7A1P49419 539 aaKnown RBP18.31■□□□□ 0.52
CTTN-203ENST00000376561 PGFP49763 221 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 SEMA3BQ13214 749 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 LRRC26Q2I0M4 334 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 ANKS3Q6ZW76 656 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 TTC9BQ8N6N2 239 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 NAT8LQ8N9F0 302 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 STKLD1Q8NE28 680 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 UHMK1Q8TAS1 419 aaKnown RBP18.31■□□□□ 0.52
CTTN-203ENST00000376561 CENPHQ9H3R5 247 aa18.31■□□□□ 0.52
CTTN-203ENST00000376561 HMGB1P1B2RPK0 211 aaPredicted RBP18.3■□□□□ 0.52
CTTN-203ENST00000376561 FAM72CH0Y354 149 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 H7C4K7 107 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 EEF2KO00418 725 aaKnown RBP18.3■□□□□ 0.52
CTTN-203ENST00000376561 ACSL3O95573 720 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 GPR17Q13304 367 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 EIF4EBP2Q13542 120 aaPredicted RBP18.3■□□□□ 0.52
CTTN-203ENST00000376561 DPYSQ14117 519 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 KYNUQ16719 465 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 SLC45A4Q5BKX6 768 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 FAM72AQ5TYM5 149 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 FAM72DQ6L9T8 149 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 RFX8Q6ZV50 586 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 FAM72BQ86X60 149 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 CDKL3Q8IVW4 592 aaPredicted RBP18.3■□□□□ 0.52
CTTN-203ENST00000376561 TAB3Q8N5C8 712 aaPredicted RBP18.3■□□□□ 0.52
CTTN-203ENST00000376561 LRRN4Q8WUT4 740 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 TKTL2Q9H0I9 626 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 SCML2Q9UQR0 700 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.3■□□□□ 0.52
CTTN-203ENST00000376561 MTMR11A4FU01 709 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 ACTN2P35609 894 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 ANKRD22Q5VYY1 191 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 KCNT2Q6UVM3 1135 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 HOOK3Q86VS8 718 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 EXOC4Q96A65 974 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 PKNOX2Q96KN3 472 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 OLFM3Q96PB7 478 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 FBXO44Q9H4M3 255 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 CWH43Q9H720 699 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 NMUR1Q9HB89 426 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 NINJ2Q9NZG7 142 aa18.3■□□□□ 0.52
CTTN-203ENST00000376561 COL4A6Q14031 1691 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 MKI67P46013 3256 aaKnown RBP18.29■□□□□ 0.52
CTTN-203ENST00000376561 LTBP2Q14767 1821 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 IRAK2O43187 625 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 MFSD11O43934 449 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 BASP1P80723 227 aaKnown RBP18.29■□□□□ 0.52
CTTN-203ENST00000376561 BZW1Q7L1Q6 419 aaKnown RBP18.29■□□□□ 0.52
CTTN-203ENST00000376561 CCDC33Q8N5R6 958 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 SPPL2BQ8TCT7 592 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 OXCT2Q9BYC2 517 aaPredicted RBP18.29■□□□□ 0.52
CTTN-203ENST00000376561 PAK5Q9P286 719 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 PLXNA3P51805 1871 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 A0A1W2PQH9 124 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 EFEMP2O95967 443 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 ITGB8P26012 769 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms