RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 RAD18Q9NS91 495 aa11.29□□□□□ -0.6
MDC1-201ENST00000376406 LNPEPQ9UIQ6 1025 aa11.29□□□□□ -0.6
MDC1-201ENST00000376406 GRK2P25098 689 aa11.29□□□□□ -0.6
MDC1-201ENST00000376406 CPA2P48052 419 aa11.29□□□□□ -0.6
MDC1-201ENST00000376406 SKOR1P84550 965 aa11.29□□□□□ -0.6
MDC1-201ENST00000376406 FOXR2Q6PJQ5 311 aa11.29□□□□□ -0.6
MDC1-201ENST00000376406 PATL1Q86TB9 770 aaKnown RBP11.29□□□□□ -0.6
MDC1-201ENST00000376406 SEMA4AQ9H3S1 761 aa11.29□□□□□ -0.6
MDC1-201ENST00000376406 TCN1P20061 433 aaPredicted RBP11.28□□□□□ -0.6
MDC1-201ENST00000376406 CCDC153Q494R4 210 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 CBWD6Q4V339 395 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 CBWD3Q5JTY5 395 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 CBWD5Q5RIA9 395 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 C1orf186Q6ZWK4 172 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 GPR142Q7Z601 462 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 KATNAL2Q8IYT4 538 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 AKT1S1Q96B36 256 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 SERPINB11Q96P15 392 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 CRLS1Q9UJA2 301 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 TRIM16O95361 564 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 ATP5BP06576 529 aaKnown RBP11.28□□□□□ -0.6
MDC1-201ENST00000376406 CYLC2Q14093 348 aaPredicted RBP11.28□□□□□ -0.6
MDC1-201ENST00000376406 GRTP1Q5TC63 336 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 STRA8Q7Z7C7 330 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 GALNT4Q8N4A0 578 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 PDGFCQ9NRA1 345 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 IARS2Q9NSE4 1012 aaKnown RBP11.28□□□□□ -0.6
MDC1-201ENST00000376406 RNF112Q9ULX5 631 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 ARFGEF2Q9Y6D5 1785 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 KLRC4O43908 158 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 MAN1A2O60476 641 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 BMP10O95393 424 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 CXCL8P10145 99 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 PSMA4P25789 261 aaKnown RBP11.28□□□□□ -0.6
MDC1-201ENST00000376406 PTPN4P29074 926 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 MRPS6P82932 125 aaKnown RBP11.28□□□□□ -0.6
MDC1-201ENST00000376406 POU4F1Q01851 419 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 RASA2Q15283 850 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 LY6KQ17RY6 165 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 ZNF606Q8WXB4 792 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 ANKRD27Q96NW4 1050 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 CXorf56Q9H5V9 222 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 TAL1P17542 331 aaPredicted RBP11.28□□□□□ -0.6
MDC1-201ENST00000376406 SERPINB5P36952 375 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 ERFP50548 548 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 SOX10P56693 466 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 WLSQ5T9L3 541 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 SEL1L3Q68CR1 1132 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 MTDHQ86UE4 582 aaKnown RBP11.28□□□□□ -0.6
MDC1-201ENST00000376406 RFWD2Q8NHY2 731 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 PRPF18Q99633 342 aaKnown RBP11.28□□□□□ -0.6
MDC1-201ENST00000376406 FDXACB1Q9BRP7 624 aaPredicted RBP11.28□□□□□ -0.6
MDC1-201ENST00000376406 MAP2K7O14733 419 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 ZBTB39O15060 712 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 ATP6V1G2O95670 118 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 MAP3K7CLP57077 242 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 TDRD5Q8NAT2 981 aaKnown RBP11.28□□□□□ -0.6
MDC1-201ENST00000376406 DDI1Q8WTU0 396 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 HDAC7Q8WUI4 952 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 TBCBQ99426 244 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 TRMT6Q9UJA5 497 aaKnown RBP11.28□□□□□ -0.6
MDC1-201ENST00000376406 DNPEPQ9ULA0 475 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 EML1O00423 815 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 ATXN3P54252 364 aaPredicted RBP11.28□□□□□ -0.6
MDC1-201ENST00000376406 IRAK1BP1Q5VVH5 260 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 PKN3Q6P5Z2 889 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 DNAAF5Q86Y56 855 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 RBBP8Q99708 897 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 DCLRE1BQ9H816 532 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 VANGL2Q9ULK5 521 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 SUFUQ9UMX1 484 aa11.28□□□□□ -0.6
MDC1-201ENST00000376406 STX7O15400 261 aaKnown RBP11.27□□□□□ -0.6
MDC1-201ENST00000376406 PMPCBO75439 489 aa11.27□□□□□ -0.6
MDC1-201ENST00000376406 RARAP10276 462 aa11.27□□□□□ -0.6
MDC1-201ENST00000376406 C6orf10Q5SRN2 563 aa11.27□□□□□ -0.6
MDC1-201ENST00000376406 FAM171A1Q5VUB5 890 aa11.27□□□□□ -0.6
MDC1-201ENST00000376406 RETSATQ6NUM9 610 aa11.27□□□□□ -0.6
MDC1-201ENST00000376406 FIBCD1Q8N539 461 aa11.27□□□□□ -0.6
MDC1-201ENST00000376406 ZCCHC9Q8N567 271 aaKnown RBP11.27□□□□□ -0.6
MDC1-201ENST00000376406 EFCAB1Q9HAE3 211 aa11.27□□□□□ -0.6
MDC1-201ENST00000376406 ZNF556Q9HAH1 456 aa11.27□□□□□ -0.6
MDC1-201ENST00000376406 ZNF510Q9Y2H8 683 aa11.27□□□□□ -0.6
MDC1-201ENST00000376406 C5orf58C9J3I9 102 aa11.27□□□□□ -0.6
MDC1-201ENST00000376406 CYP1A2P05177 515 aa11.27□□□□□ -0.6
MDC1-201ENST00000376406 ADH1AP07327 375 aa11.27□□□□□ -0.6
MDC1-201ENST00000376406 AQP5P55064 265 aa11.27□□□□□ -0.6
MDC1-201ENST00000376406 SPANXN3Q5MJ09 141 aa11.27□□□□□ -0.6
MDC1-201ENST00000376406 GAS2L1Q99501 681 aaPredicted RBP11.27□□□□□ -0.6
MDC1-201ENST00000376406 KCTD10Q9H3F6 313 aa11.27□□□□□ -0.6
MDC1-201ENST00000376406 APPL1Q9UKG1 709 aa11.27□□□□□ -0.6
MDC1-201ENST00000376406 ROBO3Q96MS0 1386 aa11.27□□□□□ -0.61
MDC1-201ENST00000376406 UBR2Q8IWV8 1755 aa11.27□□□□□ -0.61
MDC1-201ENST00000376406 ZNF839A8K0R7 811 aa11.27□□□□□ -0.61
MDC1-201ENST00000376406 ACO1P21399 889 aaKnown RBP11.27□□□□□ -0.61
MDC1-201ENST00000376406 PLOD1Q02809 727 aaPredicted RBP11.27□□□□□ -0.61
MDC1-201ENST00000376406 NAB1Q13506 487 aa11.27□□□□□ -0.61
MDC1-201ENST00000376406 COLGALT1Q8NBJ5 622 aa11.27□□□□□ -0.61
MDC1-201ENST00000376406 APOPT1Q96IL0 206 aa11.27□□□□□ -0.61
MDC1-201ENST00000376406 SPDYE5A6NIY4 337 aa11.27□□□□□ -0.61
MDC1-201ENST00000376406 HACD1B0YJ81 288 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms