RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 GOLGA8TH3BQL2 631 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 INO80B-WBP1J3KQ70 363 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 K7ERI5 159 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 LPXNO60711 386 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 SNAI1O95863 264 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-203ENST00000375315 BGNP21810 368 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 STT3AP46977 705 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 RXRGP48443 463 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 LIG4P49917 911 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 CRHR2Q13324 411 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 CCNIQ14094 377 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 USP41Q3LFD5 358 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 EFHC2Q5JST6 749 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 TMEM161BQ8NDZ6 487 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 VTI1AQ96AJ9 217 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 CGREF1Q99674 301 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 SENP7Q9BQF6 1050 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 INO80BQ9C086 356 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-203ENST00000375315 SCHIP1Q9P0W5 487 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-203ENST00000375315 NUB1Q9Y5A7 615 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 GOLGA8RI6L899 631 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 ADAM23O75077 832 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 STAM2O75886 525 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 KRT38O76015 456 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 GLRA2P23416 452 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 EPHB1P54762 984 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 MYBPC1Q00872 1141 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 CCNG2Q16589 344 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 HP1BP3Q5SSJ5 553 aaPredicted RBP12.55□□□□□ -0.4
C9orf3-203ENST00000375315 TRIML2Q8N7C3 387 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 ARPC5LQ9BPX5 153 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 TUT1Q9H6E5 874 aaKnown RBP12.55□□□□□ -0.4
C9orf3-203ENST00000375315 AP4B1Q9Y6B7 739 aa12.55□□□□□ -0.4
C9orf3-203ENST00000375315 NFASCO94856 1347 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 WDR90Q96KV7 1748 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 SPTLC1O15269 473 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 VTNP04004 478 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 GZMAP12544 262 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 ICAM3P32942 547 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 FKBP1BP68106 108 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 ZBTB17Q13105 803 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 ACAP1Q15027 740 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 ZBTB41Q5SVQ8 909 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 POU5F2Q8N7G0 328 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 CATSPER1Q8NEC5 780 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 SRPK1Q96SB4 655 aaKnown RBP12.54□□□□□ -0.4
C9orf3-203ENST00000375315 TINF2Q9BSI4 451 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 DRC3Q9H069 523 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 C12orf65Q9H3J6 166 aaKnown RBP12.54□□□□□ -0.4
C9orf3-203ENST00000375315 FLRT1Q9NZU1 646 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 SEL1LQ9UBV2 794 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 FETUBQ9UGM5 382 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 MAFBQ9Y5Q3 323 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-203ENST00000375315 EMSYQ7Z589 1322 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 PARP14Q460N5 1801 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 CRTAMO95727 393 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 OXSR1O95747 527 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-203ENST00000375315 NAT1P18440 290 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 ALDH18A1P54886 795 aaKnown RBP12.54□□□□□ -0.4
C9orf3-203ENST00000375315 RARS2Q5T160 578 aaKnown RBP12.54□□□□□ -0.4
C9orf3-203ENST00000375315 TMEM130Q8N3G9 435 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 TTC13Q8NBP0 860 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 HIPK4Q8NE63 616 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 DDHD1Q8NEL9 900 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 TRPC4APQ8TEL6 797 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 BORCS5Q969J3 196 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 RILPQ96NA2 401 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 HEPHQ9BQS7 1158 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 C6orf203Q9P0P8 240 aaPredicted RBP12.54□□□□□ -0.4
C9orf3-203ENST00000375315 AKT3Q9Y243 479 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 MYH11P35749 1972 aa12.54□□□□□ -0.4
C9orf3-203ENST00000375315 MYH9P35579 1960 aaKnown RBP12.53□□□□□ -0.4
C9orf3-203ENST00000375315 MEI4A8MW99 385 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 DNALI1O14645 258 aaPredicted RBP12.53□□□□□ -0.4
C9orf3-203ENST00000375315 ALOX15BO15296 676 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 SLC26A4O43511 780 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 NDUFB5O43674 189 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 CALCAP01258 141 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 MT-ND3P03897 115 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 CYP1A2P05177 515 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 ADRB2P07550 413 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 INSRRP14616 1297 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 SMPD1P17405 629 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 ADSSP30520 456 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 MYL7Q01449 175 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 FASTKD3Q14CZ7 662 aaKnown RBP12.53□□□□□ -0.4
C9orf3-203ENST00000375315 ZNF792Q3KQV3 632 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 EFCAB12Q6NXP0 572 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 XXYLT1Q8NBI6 393 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 MCPH1Q8NEM0 835 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 OR6J1Q8NGC5 347 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 KLF6Q99612 283 aaPredicted RBP12.53□□□□□ -0.4
C9orf3-203ENST00000375315 PI4K2AQ9BTU6 479 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 CCDC106Q9BWC9 280 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 NUF2Q9BZD4 464 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 GTF3C4Q9UKN8 822 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 SCN4AP35499 1836 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 PRR5-ARHGAP8B1AHC4 643 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 TRPA1O75762 1119 aa12.53□□□□□ -0.4
C9orf3-203ENST00000375315 LYPLA2O95372 231 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms