RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CYP51A1Q16850 503 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 PGAP1Q75T13 922 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 IFNL2Q8IZJ0 200 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 OR4C6Q8NH72 309 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 CCDC17Q96LX7 622 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 RC3H2Q9HBD1 1191 aaKnown RBP6.78□□□□□ -1.32
UBR4-204ENST00000375254 GDAQ9Y2T3 454 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 ZW10O43264 779 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 LRRN2O75325 713 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 PPARAQ07869 468 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 ZNF181Q2M3W8 571 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 CEP295NLQ96MC4 621 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 AGPAT5Q9NUQ2 364 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 RGS17Q9UGC6 210 aaPredicted RBP6.78□□□□□ -1.32
UBR4-204ENST00000375254 DAPK1P53355 1430 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 RORCP51449 518 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 TMBIM6P55061 237 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 TSTA3Q13630 321 aaPredicted RBP6.78□□□□□ -1.32
UBR4-204ENST00000375254 C6orf183Q5T699 404 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 DGLUCYQ7Z3D6 616 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 FSD1LQ9BXM9 530 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 GMIPQ9P107 970 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 ARPP21Q9UBL0 812 aaPredicted RBP6.78□□□□□ -1.32
UBR4-204ENST00000375254 PRXQ9BXM0 1461 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 ENTPD5O75356 428 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 SNRPB2P08579 225 aaKnown RBP6.78□□□□□ -1.32
UBR4-204ENST00000375254 UCHL3P15374 230 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 GRIA1P42261 906 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 GALCP54803 685 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 FAM187BQ17R55 369 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 KLHL35Q6PF15 583 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 USP43Q70EL4 1123 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 FAM228AQ86W67 206 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 PHB2Q99623 299 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 PGK1P00558 417 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 RPL10AP62906 217 aaKnown RBP6.78□□□□□ -1.32
UBR4-204ENST00000375254 SMYD4Q8IYR2 804 aaPredicted RBP6.78□□□□□ -1.32
UBR4-204ENST00000375254 PPHLN1Q8NEY8 458 aaKnown RBP6.78□□□□□ -1.32
UBR4-204ENST00000375254 ACTR6Q9GZN1 396 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 NFKBIL1Q9UBC1 381 aaPredicted RBP6.78□□□□□ -1.32
UBR4-204ENST00000375254 ITGALP20701 1170 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 PDK4Q16654 411 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 PACRGLQ8N7B6 248 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 OR2W6PQ8NHA6 318 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 ARHGEF26Q96DR7 871 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 ADPGKQ9BRR6 497 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 ZNF624Q9P2J8 865 aaPredicted RBP6.78□□□□□ -1.32
UBR4-204ENST00000375254 ACSL5Q9ULC5 683 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 PDE2AO00408 941 aaPredicted RBP6.78□□□□□ -1.32
UBR4-204ENST00000375254 EAPPQ56P03 285 aaPredicted RBP6.78□□□□□ -1.32
UBR4-204ENST00000375254 ZYG11AQ6WRX3 759 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 ZNF574Q6ZN55 896 aaPredicted RBP6.78□□□□□ -1.32
UBR4-204ENST00000375254 YEATS2Q9ULM3 1422 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 EMILIN1Q9Y6C2 1016 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 TTLL13PA6NNM8 815 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 TTC34A8MYJ7 566 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 E9PBE3 544 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 PSMD11O00231 422 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 ARMC6Q6NXE6 501 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 PLCZ1Q86YW0 608 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 BCL7BQ9BQE9 202 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 HMGXB4Q9UGU5 601 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 PDS5BQ9NTI5 1447 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 BMP10O95393 424 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 WDPCPO95876 746 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 ATP6V1B2P21281 511 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 TFDP1Q14186 410 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 MTF1Q14872 753 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 SSX2Q16385 188 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 GALNT18Q6P9A2 607 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 PYDC1Q8WXC3 89 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 RNF25Q96BH1 459 aaPredicted RBP6.78□□□□□ -1.32
UBR4-204ENST00000375254 SH3TC1Q8TE82 1336 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 BTNL10A8MVZ5 291 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 TLR2O60603 784 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 C7P10643 843 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 VAMP7P51809 220 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 RIPOR1Q6ZS17 1223 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 CYP4V2Q6ZWL3 525 aaPredicted RBP6.78□□□□□ -1.32
UBR4-204ENST00000375254 SLC44A2Q8IWA5 706 aaPredicted RBP6.78□□□□□ -1.32
UBR4-204ENST00000375254 MEIOBQ8N635 442 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 POF1BQ8WVV4 589 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 ZNF560Q96MR9 790 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 PIGSQ96S52 555 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 STK32BQ9NY57 414 aa6.78□□□□□ -1.32
UBR4-204ENST00000375254 PGRMC2O15173 223 aa6.77□□□□□ -1.32
UBR4-204ENST00000375254 CBX6O95503 412 aa6.77□□□□□ -1.32
UBR4-204ENST00000375254 CACTIN-AS1Q8N1I8 211 aa6.77□□□□□ -1.32
UBR4-204ENST00000375254 GPD1LQ8N335 351 aa6.77□□□□□ -1.32
UBR4-204ENST00000375254 ASCC1Q8N9N2 400 aaKnown RBP6.77□□□□□ -1.32
UBR4-204ENST00000375254 TEKT5Q96M29 485 aa6.77□□□□□ -1.32
UBR4-204ENST00000375254 PRDM8Q9NQV8 689 aa6.77□□□□□ -1.32
UBR4-204ENST00000375254 MAGED1Q9Y5V3 778 aaPredicted RBP6.77□□□□□ -1.32
UBR4-204ENST00000375254 UBAP1LF5GYI3 381 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 SH2B2O14492 632 aaPredicted RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 FAM153BP0C7A2 387 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 SKIV2LQ15477 1246 aaKnown RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 OTUD3Q5T2D3 398 aaPredicted RBP6.77□□□□□ -1.33
UBR4-204ENST00000375254 MIER2Q8N344 545 aa6.77□□□□□ -1.33
UBR4-204ENST00000375254 TRUB1Q8WWH5 349 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms