RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 FAM200BP0CF97 657 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 L1CAMP32004 1257 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 NOS2P35228 1153 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 PSMC4P43686 418 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 GEMIN4P57678 1058 aaKnown RBP8.5□□□□□ -1.05
UBR4-202ENST00000375224 MRPS5P82675 430 aaKnown RBP8.5□□□□□ -1.05
UBR4-202ENST00000375224 ADCY1Q08828 1119 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 PPP6R3Q5H9R7 873 aaPredicted RBP8.5□□□□□ -1.05
UBR4-202ENST00000375224 EFHC2Q5JST6 749 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 VSTM1Q6UX27 236 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 CXCL17Q6UXB2 119 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 NPNTQ6UXI9 565 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 LMNTD2Q8IXW0 634 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 SIX6OS1Q8N1H7 587 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 PQLC3Q8N755 202 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 CCDC197Q8NCU1 140 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 PCDH19Q8TAB3 1148 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 SENP8Q96LD8 212 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 FAM167BQ9BTA0 163 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 NOD2Q9HC29 1040 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 RNF19AQ9NV58 838 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 GPATCH2LQ9NWQ4 482 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 TBK1Q9UHD2 729 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 HEY1Q9Y5J3 304 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 ARHGEF37A1IGU5 675 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 MYADML2A6NDP7 307 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 HACD1B0YJ81 288 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 POC1B-GALNT4F8VUJ3 575 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 GOLGA8MH3BSY2 632 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 VIMP08670 466 aaKnown RBP8.5□□□□□ -1.05
UBR4-202ENST00000375224 SKIP12755 728 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 STX2P32856 288 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 AIF1P55008 147 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 YWHAZP63104 245 aaKnown RBP8.5□□□□□ -1.05
UBR4-202ENST00000375224 ZNF618Q5T7W0 954 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 WSCD1Q658N2 575 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 GDF6Q6KF10 455 aaPredicted RBP8.5□□□□□ -1.05
UBR4-202ENST00000375224 C6orf89Q6UWU4 347 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 DSTYKQ6XUX3 929 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 MRPL10Q7Z7H8 261 aaKnown RBP8.5□□□□□ -1.05
UBR4-202ENST00000375224 SRRM1Q8IYB3 904 aaKnown RBP8.5□□□□□ -1.05
UBR4-202ENST00000375224 DHRS1Q96LJ7 313 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 SMC6Q96SB8 1091 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 LPIN3Q9BQK8 851 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 USP29Q9HBJ7 922 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 CTNNAL1Q9UBT7 734 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 PTCH2Q9Y6C5 1203 aa8.5□□□□□ -1.05
UBR4-202ENST00000375224 FAM47DPA6NHR8 397 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 KRT15P19012 456 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 PCSK1P29120 753 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 SULT1E1P49888 294 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 IL9RQ01113 521 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 ADIGQ0VDE8 80 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 ITIH4Q14624 930 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 MYBPC3Q14896 1274 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 BBS9Q3SYG4 887 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 ANKRD22Q5VYY1 191 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 C3orf62Q6ZUJ4 267 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 NANOGNBQ7Z5D8 188 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 TRABD2AQ86V40 505 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 LCA5Q86VQ0 697 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 APLFQ8IW19 511 aaPredicted RBP8.49□□□□□ -1.05
UBR4-202ENST00000375224 FBXO36Q8NEA4 188 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 CKAP2Q8WWK9 683 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 FAM149B1Q96BN6 582 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 PGBD4Q96DM1 585 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 C10orf88Q9H8K7 445 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 SSU72Q9NP77 194 aaKnown RBP8.49□□□□□ -1.05
UBR4-202ENST00000375224 DDX43Q9NXZ2 648 aaKnown RBP8.49□□□□□ -1.05
UBR4-202ENST00000375224 RRN3Q9NYV6 651 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 CDH9Q9ULB4 789 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 FAM155AB1AL88 458 aaPredicted RBP8.49□□□□□ -1.05
UBR4-202ENST00000375224 H3BRJ5 948 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 PRPF4O43172 522 aaKnown RBP eCLIP8.49□□□□□ -1.051e-9■□□□□ 8.6
UBR4-202ENST00000375224 HCRTO43612 131 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 ZNF623O75123 536 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 PSMD7P51665 324 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 FOXD4Q12950 439 aaPredicted RBP8.49□□□□□ -1.05
UBR4-202ENST00000375224 KCNJ11Q14654 390 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 FASTKD3Q14CZ7 662 aaKnown RBP8.49□□□□□ -1.05
UBR4-202ENST00000375224 CA9Q16790 459 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 RAB6CQ53S08 254 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 SLC45A4Q5BKX6 768 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 SH2D4BQ5SQS7 431 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 FNBP1LQ5T0N5 605 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 ANKMY2Q8IV38 441 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 DEFB106AQ8N104 65 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 CYP4X1Q8N118 509 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 CLEC4CQ8WTT0 213 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 LRRC39Q96DD0 335 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 MAGEB18Q96M61 343 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 ZFP42Q96MM3 310 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 GAD1Q99259 594 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 CYTH2Q99418 400 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 SYT15Q9BQS2 421 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 RAB6CQ9H0N0 254 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 ACSS3Q9H6R3 686 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 RAB6BQ9NRW1 208 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 ITM2BQ9Y287 266 aa8.49□□□□□ -1.05
UBR4-202ENST00000375224 TMEM98Q9Y2Y6 226 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms