RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 NPR3P17342 541 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 S100A1P23297 94 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 THPOP40225 353 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 MAPK7Q13164 816 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 NFIL3Q16649 462 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 RTP2Q5QGT7 225 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 DENND5AQ6IQ26 1287 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 STXBP4Q6ZWJ1 553 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 C2CD5Q86YS7 1000 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 DENND6AQ8IWF6 608 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 UPF3BQ9BZI7 483 aaKnown RBP9.34□□□□□ -0.91
UBR4-201ENST00000375218 MTFR1LQ9H019 292 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 BOLA2Q9H3K6 86 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 CNGB3Q9NQW8 809 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 LARSQ9P2J5 1176 aaKnown RBP9.34□□□□□ -0.91
UBR4-201ENST00000375218 MYH1P12882 1939 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 CYP3A7-CYP3A51PA0A087WV96 503 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 DENND3A2RUS2 1198 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 PFDN1O60925 122 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 RECQL4O94761 1208 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 CYP21A2P08686 494 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 KRT7P08729 469 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 UBTFL6P0CB48 400 aaPredicted RBP9.34□□□□□ -0.91
UBR4-201ENST00000375218 PDCP20941 246 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 CYP3A7P24462 503 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 ADARP55265 1226 aaKnown RBP9.34□□□□□ -0.91
UBR4-201ENST00000375218 SEMA5AQ13591 1074 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 DPP9Q86TI2 863 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 LSMEM2Q8N112 164 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 GPR156Q8NFN8 814 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 DDX1Q92499 740 aaKnown RBP9.34□□□□□ -0.91
UBR4-201ENST00000375218 RAB7BQ96AH8 199 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 AIFM2Q9BRQ8 373 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 EPB41L5Q9HCM4 733 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 SNX15Q9NRS6 342 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 FAM114A2Q9NRY5 505 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 TMOD2Q9NZR1 351 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 ATP23Q9Y6H3 246 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 IQANK1A0A1B0GTG1 560 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 TTC26A0AVF1 554 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 SYNCRIPO60506 623 aaKnown RBP9.34□□□□□ -0.91
UBR4-201ENST00000375218 PF4P02776 101 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 ITGA6P23229 1130 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 ACADSBP45954 432 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 PHEXP78562 749 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 GCNT1Q02742 428 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 GOLGA8FQ08AF8 430 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 GOLGA8DPQ0D2H9 430 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 TRAP1Q12931 704 aaKnown RBP9.34□□□□□ -0.91
UBR4-201ENST00000375218 PDK1Q15118 436 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 MAPRE2Q15555 327 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 GRTP1Q5TC63 336 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 CENPPQ6IPU0 288 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 GPR142Q7Z601 462 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 IFI44Q8TCB0 444 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 SMG7Q92540 1137 aaKnown RBP9.34□□□□□ -0.91
UBR4-201ENST00000375218 OSBPL9Q96SU4 736 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 FAM8A1Q9UBU6 413 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 DDX25Q9UHL0 483 aaKnown RBP9.34□□□□□ -0.91
UBR4-201ENST00000375218 RNF24Q9Y225 148 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 PHIPQ8WWQ0 1821 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 MAST3O60307 1309 aa9.34□□□□□ -0.91
UBR4-201ENST00000375218 LRRD1A4D1F6 860 aa9.34□□□□□ -0.92
UBR4-201ENST00000375218 SNTNA6NMZ2 147 aa9.34□□□□□ -0.92
UBR4-201ENST00000375218 H3BUI4 141 aa9.34□□□□□ -0.92
UBR4-201ENST00000375218 IGF2BP3O00425 579 aaKnown RBP eCLIP9.34□□□□□ -0.92
UBR4-201ENST00000375218 FPGTO14772 594 aa9.34□□□□□ -0.92
UBR4-201ENST00000375218 BMP1P13497 986 aa9.34□□□□□ -0.92
UBR4-201ENST00000375218 G0S2P27469 103 aa9.34□□□□□ -0.92
UBR4-201ENST00000375218 MC4RP32245 332 aa9.34□□□□□ -0.92
UBR4-201ENST00000375218 ANTXR2P58335 489 aa9.34□□□□□ -0.92
UBR4-201ENST00000375218 ABATP80404 500 aa9.34□□□□□ -0.92
UBR4-201ENST00000375218 MAP4K2Q12851 820 aa9.34□□□□□ -0.92
UBR4-201ENST00000375218 STRIP1Q5VSL9 837 aa9.34□□□□□ -0.92
UBR4-201ENST00000375218 DEGS2Q6QHC5 323 aa9.34□□□□□ -0.92
UBR4-201ENST00000375218 DDX53Q86TM3 631 aaKnown RBP9.34□□□□□ -0.92
UBR4-201ENST00000375218 NUP88Q99567 741 aaPredicted RBP9.34□□□□□ -0.92
UBR4-201ENST00000375218 SNX25Q9H3E2 840 aa9.34□□□□□ -0.92
UBR4-201ENST00000375218 PARVBQ9HBI1 364 aa9.34□□□□□ -0.92
UBR4-201ENST00000375218 ZNF287Q9HBT7 754 aa9.34□□□□□ -0.92
UBR4-201ENST00000375218 GALNT8Q9NY28 637 aa9.34□□□□□ -0.92
UBR4-201ENST00000375218 FHOD1Q9Y613 1164 aa9.34□□□□□ -0.92
UBR4-201ENST00000375218 OR5K4A6NMS3 321 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 UBE2CO00762 179 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 DIRAS3O95661 229 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 MADCAM1Q13477 382 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 GRIN2CQ14957 1233 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 SMTNL2Q2TAL5 461 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 HSF5Q4G112 596 aaPredicted RBP9.33□□□□□ -0.92
UBR4-201ENST00000375218 VARS2Q5ST30 1063 aaKnown RBP9.33□□□□□ -0.92
UBR4-201ENST00000375218 TRAF7Q6Q0C0 670 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 AGBL5Q8NDL9 886 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 AKR7LQ8NHP1 331 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 RIN2Q8WYP3 895 aaPredicted RBP9.33□□□□□ -0.92
UBR4-201ENST00000375218 MRPS27Q92552 414 aaKnown RBP9.33□□□□□ -0.92
UBR4-201ENST00000375218 TMEM120AQ9BXJ8 343 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 CEP44Q9C0F1 390 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 KLHL4Q9C0H6 718 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 SERTM2A0A1B0GWG4 89 aa9.33□□□□□ -0.92
UBR4-201ENST00000375218 NDUFS8O00217 210 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms