RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 EPHA3P29320 983 aa21.23■□□□□ 0.99
TMEFF1-201ENST00000374879 ECE1P42892 770 aa21.23■□□□□ 0.99
TMEFF1-201ENST00000374879 ATXN3P54252 364 aaPredicted RBP21.23■□□□□ 0.99
TMEFF1-201ENST00000374879 GPR180Q86V85 440 aa21.23■□□□□ 0.99
TMEFF1-201ENST00000374879 NDUFAF2Q8N183 169 aa21.23■□□□□ 0.99
TMEFF1-201ENST00000374879 FBXL13Q8NEE6 735 aa21.23■□□□□ 0.99
TMEFF1-201ENST00000374879 ACTL9Q8TC94 416 aa21.23■□□□□ 0.99
TMEFF1-201ENST00000374879 TUBA8Q9NY65 449 aaPredicted RBP21.23■□□□□ 0.99
TMEFF1-201ENST00000374879 CROTQ9UKG9 612 aa21.23■□□□□ 0.99
TMEFF1-201ENST00000374879 COQ4Q9Y3A0 265 aa21.23■□□□□ 0.99
TMEFF1-201ENST00000374879 C7orf72A4D263 438 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 PSMD12O00232 456 aaPredicted RBP21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 DCXO43602 365 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 NDUFB5O43674 189 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 C1QAP02745 245 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 CDKN2BP42772 138 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 OTUD4Q01804 1114 aaKnown RBP21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 PPP6R3Q5H9R7 873 aaPredicted RBP21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 TEDDM1Q5T9Z0 273 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 PLEKHA7Q6IQ23 1121 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 TMEM214Q6NUQ4 689 aaKnown RBP21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 ATG14Q6ZNE5 492 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 KCTD17Q8N5Z5 321 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 FEZF2Q8TBJ5 459 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 ACCSQ96QU6 501 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 GCOM2Q9BZD3 368 aaPredicted RBP21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 PNPOQ9NVS9 261 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 TEX264Q9Y6I9 313 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 NRXN2Q9P2S2 1712 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 F8VP50 259 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 H3BNH8 94 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 JAG1P78504 1218 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 FLOT2Q14254 428 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 XKR5Q6UX68 686 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 UNC45BQ8IWX7 931 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 RSAD2Q8WXG1 361 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 NACC1Q96RE7 527 aa21.22■□□□□ 0.99
TMEFF1-201ENST00000374879 UTRNP46939 3433 aa21.21■□□□□ 0.99
TMEFF1-201ENST00000374879 GH2P01242 217 aa21.21■□□□□ 0.99
TMEFF1-201ENST00000374879 FASTKD1Q53R41 847 aaKnown RBP21.21■□□□□ 0.99
TMEFF1-201ENST00000374879 C12orf56Q8IXR9 622 aa21.21■□□□□ 0.99
TMEFF1-201ENST00000374879 THAP11Q96EK4 314 aa21.21■□□□□ 0.99
TMEFF1-201ENST00000374879 TMEM8AQ9HCN3 771 aa21.21■□□□□ 0.99
TMEFF1-201ENST00000374879 PCDHB2Q9Y5E7 798 aa21.21■□□□□ 0.99
TMEFF1-201ENST00000374879 H0YIN7 160 aa21.21■□□□□ 0.99
TMEFF1-201ENST00000374879 P4HBP07237 508 aaKnown RBP21.21■□□□□ 0.99
TMEFF1-201ENST00000374879 XRCC1P18887 633 aaPredicted RBP21.21■□□□□ 0.99
TMEFF1-201ENST00000374879 SLC1A6P48664 564 aa21.21■□□□□ 0.99
TMEFF1-201ENST00000374879 SNRNP35Q16560 246 aaKnown RBP21.21■□□□□ 0.99
TMEFF1-201ENST00000374879 RWDD4Q6NW29 188 aaKnown RBP21.21■□□□□ 0.99
TMEFF1-201ENST00000374879 ARCQ7LC44 396 aa21.21■□□□□ 0.99
TMEFF1-201ENST00000374879 OLAHQ9NV23 265 aa21.21■□□□□ 0.99
TMEFF1-201ENST00000374879 CDC14AQ9UNH5 594 aa21.21■□□□□ 0.99
TMEFF1-201ENST00000374879 ZNF26P17031 533 aaPredicted RBP21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 C6orf183Q5T699 404 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 SNRNP48Q6IEG0 339 aaKnown RBP21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 NIPAL1Q6NVV3 410 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 C16orf87Q6PH81 154 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 TRPC4APQ8TEL6 797 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 STN1Q9H668 368 aaKnown RBP21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 IP6K2Q9UHH9 426 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 MYRFQ9Y2G1 1151 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 TTLL3Q9Y4R7 772 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 ZHX2Q9Y6X8 837 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 ARHGEF37A1IGU5 675 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 ARHGEF35A5YM69 484 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 ATE1O95260 518 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 PTPN1P18031 435 aaKnown RBP21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 RPL10P27635 214 aaKnown RBP21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 KPNA1P52294 538 aaPredicted RBP21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 THOP1P52888 689 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 RPL10AP62906 217 aaKnown RBP21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 ZNF252P-AS1Q0IIN9 211 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 DACT2Q5SW24 774 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 STRIP1Q5VSL9 837 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 ZFP1Q6P2D0 407 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 ADGRF2Q8IZF7 708 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 MRIQ9BWK5 157 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 NACA2Q9H009 215 aa21.2■□□□□ 0.98
TMEFF1-201ENST00000374879 IGLV3-22A0A075B6J6 115 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 AIM2O14862 343 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 GSRP00390 522 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 CAPNS1P04632 268 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 TXNL4AP83876 142 aaKnown RBP21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 MS4A2Q01362 244 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 PPP2R5DQ14738 602 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 C16orf46Q6P387 395 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 GPR141Q7Z602 305 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 FAM71DQ8N9W8 422 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 BHLHE22Q8NFJ8 381 aaPredicted RBP21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 TBC1D15Q8TC07 691 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 CHPT1Q8WUD6 406 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 WDR18Q9BV38 432 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 SMYD2Q9NRG4 433 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 PRR12Q9ULL5 1215 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 ZBTB14O43829 449 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 UGT1A6P19224 532 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 EIF2AK2P19525 551 aaKnown RBP21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 UGT1A1P22309 533 aa21.19■□□□□ 0.98
TMEFF1-201ENST00000374879 UGT1A4P22310 534 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms