RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 PRKD2Q9BZL6 878 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 SFXN1Q9H9B4 322 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 PCDH18Q9HCL0 1135 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 ANLNQ9NQW6 1124 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 MTMR10Q9NXD2 777 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 RCOR3Q9P2K3 495 aaPredicted RBP17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 SFMBT1Q9UHJ3 866 aa17.89■□□□□ 0.45
HLA-DMA-201ENST00000374843 ANAPC1Q9H1A4 1944 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 hCG_1818297A0A087WSY0 165 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 SYNJ2BP-COX16A0A087WUM0 186 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 SOBPA7XYQ1 873 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 KCNU1A8MYU2 1149 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 COCHO43405 550 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 KDELR1P24390 212 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 GABRR2P28476 465 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 ATP5C1P36542 298 aaKnown RBP17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 ZNF135P52742 658 aaPredicted RBP17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 SEMA3BQ13214 749 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 MTA1Q13330 715 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 KLF1Q13351 362 aaPredicted RBP17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 DPYSL3Q14195 570 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 CA9Q16790 459 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 ARL13BQ3SXY8 428 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 EFHC2Q5JST6 749 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 CCDC181Q5TID7 509 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 AADACL2Q6P093 401 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 ANKS1BQ7Z6G8 1248 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 RBM23Q86U06 439 aaKnown RBP17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 SLC13A5Q86YT5 568 aaPredicted RBP17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 HS6ST3Q8IZP7 471 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 EFHBQ8N7U6 833 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 CEP112Q8N8E3 955 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 GCNAQ96QF7 691 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 OSBPL8Q9BZF1 889 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 GPATCH2LQ9NWQ4 482 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 COX16Q9P0S2 106 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 RASAL2Q9UJF2 1139 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 NUDT5Q9UKK9 219 aa17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 COLQQ9Y215 455 aaPredicted RBP17.88■□□□□ 0.45
HLA-DMA-201ENST00000374843 PI4K2BG5E9Z4 385 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 TBX18O95935 607 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 FGGP02679 453 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 PTPN2P17706 415 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 DDX6P26196 483 aaKnown RBP eCLIP17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 L1CAMP32004 1257 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 CETN2P41208 172 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 PAFAH1B1P43034 410 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 CDH6P55285 790 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 TBX4P57082 545 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 NRG1Q02297 640 aaPredicted RBP17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 HYAL1Q12794 435 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 ZC3H12AQ5D1E8 599 aaKnown RBP17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 TFDP3Q5H9I0 405 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 PRSS36Q5K4E3 855 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 MAP7D3Q8IWC1 876 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 KCTD6Q8NC69 237 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 MNS1Q8NEH6 495 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 MRPS31Q92665 395 aaKnown RBP17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 RNF25Q96BH1 459 aaPredicted RBP17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 RPGRIP1Q96KN7 1286 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 HAPLN3Q96S86 360 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 KCTD15Q96SI1 283 aaPredicted RBP17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 CORO1BQ9BR76 489 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 HERPUD2Q9BSE4 406 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 TKTL2Q9H0I9 626 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 OSBPL2Q9H1P3 480 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 TTYH1Q9H313 450 aaPredicted RBP17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 WDCPQ9H6R7 721 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 SMARCAL1Q9NZC9 954 aa17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 DNMT3BQ9UBC3 853 aaKnown RBP17.87■□□□□ 0.45
HLA-DMA-201ENST00000374843 DENND4CQ5VZ89 1909 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 MYO7AQ13402 2215 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 C2orf78A6NCI8 922 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 RIOK3O14730 519 aaKnown RBP17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 MOSPD3O75425 235 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 GLP2RO95838 553 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 RHOP08100 348 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 CD48P09326 243 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 POU3F3P20264 500 aaPredicted RBP17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 IL4RP24394 825 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 RBM10P98175 930 aaKnown RBP17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 KRT81Q14533 505 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 SIX1Q15475 284 aaPredicted RBP17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 ODF2Q5BJF6 829 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 TCEAL5Q5H9L2 206 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 ZFYVE27Q5T4F4 411 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 CCDC50Q8IVM0 306 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 SHKBP1Q8TBC3 707 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 PLD4Q96BZ4 506 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 ZFRQ96KR1 1074 aaKnown RBP17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 CARD6Q9BX69 1037 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 DHX35Q9H5Z1 703 aaKnown RBP17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 HCFC1R1Q9NWW0 138 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 ZMYM5Q9UJ78 669 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 CLUHO75153 1309 aa17.86■□□□□ 0.45
HLA-DMA-201ENST00000374843 SLC12A8A0AV02 714 aa17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 NRG2O14511 850 aaPredicted RBP17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 APOEP02649 317 aa17.85■□□□□ 0.45
HLA-DMA-201ENST00000374843 SRGAP2BP0DMP2 458 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms