RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 SMYD2Q9NRG4 433 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 FZD10Q9ULW2 581 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 TRIM33Q9UPN9 1127 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 ARL2BPQ9Y2Y0 163 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 MANSC4A6NHS7 340 aaPredicted RBP16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 FAM72CH0Y354 149 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 AP1G2O75843 785 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 MT-ND3P03897 115 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 USP17L7P0C7H9 530 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 PYGBP11216 843 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 ARL4AP40617 200 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 RPL34P49207 117 aaKnown RBP16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 OLIG2Q13516 323 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 FAM72AQ5TYM5 149 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 FAM72DQ6L9T8 149 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 DSTYKQ6XUX3 929 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 ZNF534Q76KX8 674 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 TBC1D1Q86TI0 1168 aaPredicted RBP16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 FAM72BQ86X60 149 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 ECHDC2Q86YB7 292 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 NME8Q8N427 588 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 KIF2BQ8N4N8 673 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 CCNYQ8ND76 341 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 EDEM1Q92611 657 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 PCED1BQ96HM7 432 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 TMEM51Q9NW97 253 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 SENP1Q9P0U3 644 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 SLC17A6Q9P2U8 582 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 TTLL3Q9Y4R7 772 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 SNX10Q9Y5X0 201 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 USP3Q9Y6I4 520 aa16.54■□□□□ 0.24
CNKSR1-202ENST00000374253 ZNF236Q9UL36 1845 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 ARL5CA6NH57 179 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 CAPN9O14815 690 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 OVGP1Q12889 678 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 TRIB2Q92519 343 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 GTF2IRD1Q9UHL9 959 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 SLC12A4Q9UP95 1085 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 CFAP69A5D8W1 941 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 I6L893 689 aaPredicted RBP16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 FYNP06241 537 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 THP07101 528 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 FAM200BP0CF97 657 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 GHRP10912 638 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 LRPAP1P30533 357 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 HOXC8P31273 242 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 PDK4Q16654 411 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 TAF2Q6P1X5 1199 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 SAPCD2Q86UD0 394 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 ANKLE1Q8NAG6 615 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 RNF139Q8WU17 664 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 SLC44A1Q8WWI5 657 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 SMOQ99835 787 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 SYT15Q9BQS2 421 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 KLHL14Q9P2G3 628 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 PRKAG3Q9UGI9 489 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 INPP5FQ9Y2H2 1132 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 TRPV2Q9Y5S1 764 aa16.53■□□□□ 0.24
CNKSR1-202ENST00000374253 F8W810 466 aa16.52■□□□□ 0.24
CNKSR1-202ENST00000374253 CD52P31358 61 aa16.52■□□□□ 0.24
CNKSR1-202ENST00000374253 THPOP40225 353 aa16.52■□□□□ 0.24
CNKSR1-202ENST00000374253 DEUP1Q05D60 604 aa16.52■□□□□ 0.24
CNKSR1-202ENST00000374253 UNC5AQ6ZN44 842 aa16.52■□□□□ 0.24
CNKSR1-202ENST00000374253 AGMOQ6ZNB7 445 aa16.52■□□□□ 0.24
CNKSR1-202ENST00000374253 STRADAQ7RTN6 431 aa16.52■□□□□ 0.24
CNKSR1-202ENST00000374253 BANPQ8N9N5 519 aa16.52■□□□□ 0.24
CNKSR1-202ENST00000374253 HTR3CQ8WXA8 447 aa16.52■□□□□ 0.24
CNKSR1-202ENST00000374253 ZNF75CPQ92670 426 aaPredicted RBP16.52■□□□□ 0.24
CNKSR1-202ENST00000374253 PTPRN2Q92932 1015 aa16.52■□□□□ 0.24
CNKSR1-202ENST00000374253 QKIQ96PU8 341 aaKnown RBP eCLIP16.52■□□□□ 0.24
CNKSR1-202ENST00000374253 FAM111AQ96PZ2 611 aa16.52■□□□□ 0.24
CNKSR1-202ENST00000374253 PHACTR1Q9C0D0 580 aa16.52■□□□□ 0.24
CNKSR1-202ENST00000374253 IL1RAPL1Q9NZN1 696 aa16.52■□□□□ 0.24
CNKSR1-202ENST00000374253 TRIM49D1C9J1S8 452 aa16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 SMAPO00193 183 aa16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 GABRDO14764 452 aa16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 MGEA5O60502 916 aa16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 LPXNO60711 386 aa16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 DUSP11O75319 330 aaKnown RBP16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 RASSF9O75901 435 aa16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 IFRD2Q12894 506 aaPredicted RBP16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 RGMBQ6NW40 437 aa16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 CASC4Q6P4E1 433 aa16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 FAM35AQ86V20 835 aa16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 PDCD7Q8N8D1 485 aaKnown RBP16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 ZMIZ2Q8NF64 920 aa16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 DEPDC1BQ8WUY9 529 aa16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 TFB1MQ8WVM0 346 aaKnown RBP16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 TTC17Q96AE7 1141 aa16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 MTG1Q9BT17 334 aaPredicted RBP16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 ECT2Q9H8V3 914 aa16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 KLC4Q9NSK0 619 aa16.52■□□□□ 0.23
CNKSR1-202ENST00000374253 KCNK1O00180 336 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 DAB1O75553 588 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 C1QAP02745 245 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 CSH1P0DML2 217 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 CSH2P0DML3 217 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 NCAM1P13591 858 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 BRCC3P46736 316 aa16.51■□□□□ 0.23
CNKSR1-202ENST00000374253 KCNJ2P63252 427 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms