RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 SPG21Q9NZD8 308 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 CRYL1Q9Y2S2 319 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 HLA-DQA1Q5Y7H0 255 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 C15orf52Q6ZUT6 534 aaKnown RBP11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 STRA8Q7Z7C7 330 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 CENPLQ8N0S6 344 aaPredicted RBP11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 SEC16BQ96JE7 1060 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 ZNF229Q9UJW7 825 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 FBXL21Q9UKT6 434 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 DNPEPQ9ULA0 475 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 CRABP2P29373 138 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 NAA20P61599 178 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 PEX6Q13608 980 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 GNA13Q14344 377 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 DACT2Q5SW24 774 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 ATAD3BQ5T9A4 648 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 SUSD6Q92537 303 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 QRFPRQ96P65 431 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 FAM111AQ96PZ2 611 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 NMRAL1Q9HBL8 299 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 AP3M1Q9Y2T2 418 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 ERI2A8K979 691 aaKnown RBP11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 OPLAHO14841 1288 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 FGF10O15520 208 aaPredicted RBP11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 POMCP01189 267 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 EIF4BP23588 611 aaKnown RBP11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 OR1E1P30953 314 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 PPM1AP35813 382 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 NDST1P52848 882 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 LRRC8DQ7L1W4 858 aa11.39□□□□□ -0.59
PHACTR4-202ENST00000373839 INO80Q9ULG1 1556 aaPredicted RBP11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 VPS4BO75351 444 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 USP1O94782 785 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 BTKQ06187 659 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 FAXCQ5TGI0 409 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 MAP4K3Q8IVH8 894 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 CYP4Z2PQ8N1L4 340 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 COLGALT1Q8NBJ5 622 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 ZIM3Q96PE6 472 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 TMEM237Q96Q45 408 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 MRPL17Q9NRX2 175 aaKnown RBP11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 ABCC13Q9NSE7 274 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 ZSCAN32Q9NX65 697 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 SERPINA4P29622 427 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 BCL2L1Q07817 233 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 ADRM1Q16186 407 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 LY6KQ17RY6 165 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 USP39Q53GS9 565 aaKnown RBP11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 MICU2Q8IYU8 434 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 INPP5DQ92835 1189 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 C2orf49Q9BVC5 232 aaPredicted RBP11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 GLIS2Q9BZE0 524 aaPredicted RBP11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 TAS2R13Q9NYV9 303 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 UBA2Q9UBT2 640 aaPredicted RBP11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 ANKRD6Q9Y2G4 727 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 CAB39Q9Y376 341 aaPredicted RBP11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 PDE2AO00408 941 aaPredicted RBP11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 AKAP3O75969 853 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 LSP1P33241 339 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 CASP4P49662 377 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 KLK7P49862 253 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 CCNG1P51959 295 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 NOGQ13253 232 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 PDPK2PQ6A1A2 396 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 LRRC49Q8IUZ0 686 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 EPS8L2Q9H6S3 715 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 POLR2EP19388 210 aaKnown RBP11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 KLC1Q07866 573 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 CYP2A13Q16696 494 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 SPANXN3Q5MJ09 141 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 GRTP1Q5TC63 336 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 PRMT9Q6P2P2 845 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 TRMT11Q7Z4G4 463 aaKnown RBP11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 MCOLN2Q8IZK6 566 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 MAGEB18Q96M61 343 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 SIKE1Q9BRV8 207 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 POPDC2Q9HBU9 364 aa11.38□□□□□ -0.59
PHACTR4-202ENST00000373839 CCT8L1PA6NM43 557 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 QSOX1O00391 747 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 PBLDP30039 288 aaPredicted RBP11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 GP5P40197 560 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 NUDT2P50583 147 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 CCDC153Q494R4 210 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 KCNT1Q5JUK3 1230 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 NKX2-3Q8TAU0 364 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 HASPINQ8TF76 798 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 ZNF606Q8WXB4 792 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 TINF2Q9BSI4 451 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 LGALS2P05162 132 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 TUBP50607 506 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 OTOAQ7RTW8 1153 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 SH2D3CQ8N5H7 860 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 PPP1R10Q96QC0 940 aaKnown RBP11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 ADAM33Q9BZ11 813 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 GPATCH2LQ9NWQ4 482 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 TRIM10Q9UDY6 481 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 FBXO10Q9UK96 956 aa11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 PNMA8BQ9ULN7 279 aaPredicted RBP11.37□□□□□ -0.59
PHACTR4-202ENST00000373839 PIK3C2BO00750 1634 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms