RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 ZDHHC18Q9NUE0 388 aa17.89■□□□□ 0.46
PTPRU-202ENST00000373779 TMEM59LQ9UK28 342 aa17.89■□□□□ 0.46
PTPRU-202ENST00000373779 C2CD2Q9Y426 696 aa17.89■□□□□ 0.46
PTPRU-202ENST00000373779 TPP1O14773 563 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 FOXD4Q12950 439 aaPredicted RBP17.89■□□□□ 0.45
PTPRU-202ENST00000373779 GPR162Q16538 588 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 FKBP1CQ5VVH2 108 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 FAM13CQ8NE31 585 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 XPNPEP3Q9NQH7 507 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 LGALS13Q9UHV8 139 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 ADGRA2Q96PE1 1338 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 ACO1P21399 889 aaKnown RBP17.89■□□□□ 0.45
PTPRU-202ENST00000373779 ZNF143P52747 638 aaPredicted RBP17.89■□□□□ 0.45
PTPRU-202ENST00000373779 C15orf59Q2T9L4 293 aaPredicted RBP17.89■□□□□ 0.45
PTPRU-202ENST00000373779 PIK3R5Q8WYR1 880 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 RIC8BQ9NVN3 520 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 FOXO6A8MYZ6 492 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 NCAM2O15394 837 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 NPM3O75607 178 aaKnown RBP17.89■□□□□ 0.45
PTPRU-202ENST00000373779 JCHAINP01591 159 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 CRY2Q49AN0 593 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 ZDHHC24Q6UX98 284 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 SH3TC2Q8TF17 1288 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 VPS50Q96JG6 964 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 FAM84AQ96KN4 292 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 VTI1BQ9UEU0 232 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 APPL1Q9UKG1 709 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 V9GYQ6 96 aa17.89■□□□□ 0.45
PTPRU-202ENST00000373779 RTP1P59025 263 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 CXCL9Q07325 125 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 CES3Q6UWW8 571 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 RHBDL2Q9NX52 303 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 CD274Q9NZQ7 290 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 SLC17A7Q9P2U7 560 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 TMEM191CA6NGB0 347 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 KIZQ2M2Z5 673 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 KCNMB4Q86W47 210 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 OR6Y1Q8NGX8 325 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 RFWD2Q8NHY2 731 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 GLIS2Q9BZE0 524 aaPredicted RBP17.88■□□□□ 0.45
PTPRU-202ENST00000373779 FBXO6Q9NRD1 293 aaPredicted RBP17.88■□□□□ 0.45
PTPRU-202ENST00000373779 LIN7AO14910 233 aaPredicted RBP17.88■□□□□ 0.45
PTPRU-202ENST00000373779 PYGLP06737 847 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 DACT3Q96B18 629 aaPredicted RBP17.88■□□□□ 0.45
PTPRU-202ENST00000373779 PCDHA11Q9Y5I1 949 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 ALBP02768 609 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 CPB1P15086 417 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 DMAC2Q9NW81 257 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 NOCTQ9UK39 431 aaKnown RBP17.88■□□□□ 0.45
PTPRU-202ENST00000373779 IGLV3-22A0A075B6J6 115 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 FBXO21O94952 628 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 PTPN7P35236 360 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 PRKAA2P54646 552 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 SLC35G1Q2M3R5 365 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 PLEKHA7Q6IQ23 1121 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 ZFP1Q6P2D0 407 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 RIPOR1Q6ZS17 1223 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 SNX32Q86XE0 403 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 TUBGCP3Q96CW5 907 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 BEGAINQ9BUH8 593 aa17.88■□□□□ 0.45
PTPRU-202ENST00000373779 TCRBV9S1A1TA0A576 114 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 WNT10BO00744 389 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 SLC25A3Q00325 362 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 UBP1Q9NZI7 540 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 ANPEPP15144 967 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 MON1BQ7L1V2 547 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 RNF157Q96PX1 679 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 FICDQ9BVA6 458 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 KATNAL1Q9BW62 490 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 AP4S1Q9Y587 144 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 RHOBTB1O94844 696 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 CHRNB2P17787 502 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 SLC1A5Q15758 541 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 ARCQ7LC44 396 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 ALYREFQ86V81 257 aaKnown RBP17.87■□□□□ 0.45
PTPRU-202ENST00000373779 MPP4Q96JB8 637 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 UBDO15205 165 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 TNFAIP8O95379 198 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 HMBSP08397 361 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 PTP4A2Q12974 167 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 SNAPC2Q13487 334 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 CSHL1Q14406 222 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 CYP1B1Q16678 543 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 AGKQ53H12 422 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 FBXO47Q5MNV8 452 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 TRAPPC12Q8WVT3 735 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 ARL8BQ9NVJ2 186 aa17.87■□□□□ 0.45
PTPRU-202ENST00000373779 AFF4Q9UHB7 1163 aaKnown RBP17.87■□□□□ 0.45
PTPRU-202ENST00000373779 HEATR9A2RTY3 570 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 CYB561D2O14569 222 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 DDHD2O94830 711 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 RBP1P09455 135 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 CTSHP09668 335 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 ETFBP38117 255 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 TNFSF9P41273 254 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 MMRN1Q13201 1228 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 CLNKQ7Z7G1 428 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 ZFRQ96KR1 1074 aaKnown RBP17.86■□□□□ 0.45
PTPRU-202ENST00000373779 NFASCO94856 1347 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 PCYT1AP49585 367 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms