RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 ZFP69BQ9UJL9 534 aa24.64■■□□□ 1.53
CDK9-201ENST00000373264 MBLAC1A4D2B0 266 aaPredicted RBP24.63■■□□□ 1.53
CDK9-201ENST00000373264 EPHB2P29323 1055 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 ALDH3A1P30838 453 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 MAGEA3P43357 314 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 SERPINB4P48594 390 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 KIAA0319Q5VV43 1072 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 BSPRYQ5W0U4 402 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 TLK2Q86UE8 772 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 SMG8Q8ND04 991 aaKnown RBP24.63■■□□□ 1.53
CDK9-201ENST00000373264 MAGEC3Q8TD91 643 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 GNEQ9Y223 722 aaKnown RBP24.63■■□□□ 1.53
CDK9-201ENST00000373264 C2CD2LO14523 706 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 COPEO14579 308 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 GCATO75600 419 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 DCTN3O75935 186 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 F7P08709 466 aaPredicted RBP24.63■■□□□ 1.53
CDK9-201ENST00000373264 PRKCHP24723 683 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 MAGEA6P43360 314 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 CTC1Q2NKJ3 1217 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 FYB2Q5VWT5 728 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 CLNKQ7Z7G1 428 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 ARMC2Q8NEN0 867 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 QKIQ96PU8 341 aaKnown RBP eCLIP24.63■■□□□ 1.53
CDK9-201ENST00000373264 LRMDAQ9H2I8 198 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 FAM124BQ9H5Z6 455 aaPredicted RBP24.63■■□□□ 1.53
CDK9-201ENST00000373264 IPPQ9Y573 584 aa24.63■■□□□ 1.53
CDK9-201ENST00000373264 PDCD11Q14690 1871 aaKnown RBP24.63■■□□□ 1.53
CDK9-201ENST00000373264 SMIM35A0A1B0GVV1 85 aa24.62■■□□□ 1.53
CDK9-201ENST00000373264 LILRA4P59901 499 aa24.62■■□□□ 1.53
CDK9-201ENST00000373264 NME3Q13232 169 aa24.62■■□□□ 1.53
CDK9-201ENST00000373264 PRKD1Q15139 912 aaPredicted RBP24.62■■□□□ 1.53
CDK9-201ENST00000373264 HEATR6Q6AI08 1181 aaKnown RBP24.62■■□□□ 1.53
CDK9-201ENST00000373264 PAQR9Q6ZVX9 377 aa24.62■■□□□ 1.53
CDK9-201ENST00000373264 TTC7BQ86TV6 843 aa24.62■■□□□ 1.53
CDK9-201ENST00000373264 ZDHHC17Q8IUH5 632 aa24.62■■□□□ 1.53
CDK9-201ENST00000373264 PCMTD2Q9NV79 361 aa24.62■■□□□ 1.53
CDK9-201ENST00000373264 HEY2Q9UBP5 337 aa24.62■■□□□ 1.53
CDK9-201ENST00000373264 WDR27A2RRH5 827 aa24.62■■□□□ 1.53
CDK9-201ENST00000373264 CREB3O43889 395 aa24.62■■□□□ 1.53
CDK9-201ENST00000373264 RPSAP08865 295 aaKnown RBP24.62■■□□□ 1.53
CDK9-201ENST00000373264 GMPRP36959 345 aa24.62■■□□□ 1.53
CDK9-201ENST00000373264 SKIV2L2P42285 1042 aaKnown RBP24.62■■□□□ 1.53
CDK9-201ENST00000373264 B3GALNT2Q8NCR0 500 aa24.62■■□□□ 1.53
CDK9-201ENST00000373264 OXNAD1Q96HP4 312 aaPredicted RBP24.62■■□□□ 1.53
CDK9-201ENST00000373264 TBC1D10AQ9BXI6 508 aa24.62■■□□□ 1.53
CDK9-201ENST00000373264 ARHGEF4Q9NR80 690 aa24.62■■□□□ 1.53
CDK9-201ENST00000373264 SEPT10Q9P0V9 454 aa24.62■■□□□ 1.53
CDK9-201ENST00000373264 FAM237BA0A1B0GVD1 139 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 GM2AP17900 193 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 TAF6P49848 677 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 IRX4P78413 519 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 WSCD1Q658N2 575 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 ANKRD23Q86SG2 305 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 PDCD7Q8N8D1 485 aaKnown RBP24.61■■□□□ 1.53
CDK9-201ENST00000373264 EBNA1BP2Q99848 306 aaKnown RBP24.61■■□□□ 1.53
CDK9-201ENST00000373264 FZD10Q9ULW2 581 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 TIMM13Q9Y5L4 95 aaPredicted RBP24.61■■□□□ 1.53
CDK9-201ENST00000373264 SPAG6O75602 509 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 MYL3P08590 195 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 SNRPAP09012 282 aaKnown RBP24.61■■□□□ 1.53
CDK9-201ENST00000373264 SERPINB3P29508 390 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 SLC8A1P32418 973 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 ADAM17P78536 824 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 ANKRD20A2Q5SQ80 823 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 ANKRD20A1Q5TYW2 823 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 ANKRD20A3Q5VUR7 823 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 HTR3CQ8WXA8 447 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 TMEM120AQ9BXJ8 343 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 ANLNQ9NQW6 1124 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 GDAP2Q9NXN4 497 aa24.61■■□□□ 1.53
CDK9-201ENST00000373264 GLTPD2A6NH11 291 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 TROVE2P10155 538 aaKnown RBP eCLIP24.6■■□□□ 1.535e-18■■■□□ 18.6
CDK9-201ENST00000373264 MATKP42679 507 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 RPL34P49207 117 aaKnown RBP24.6■■□□□ 1.53
CDK9-201ENST00000373264 AP1B1Q10567 949 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 NBPF20Q3BBV1 942 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 ARL8BQ9NVJ2 186 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 NKX1-2Q9UD57 310 aaPredicted RBP24.6■■□□□ 1.53
CDK9-201ENST00000373264 DCAF8L1A6NGE4 600 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 FAM72CH0Y354 149 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 PTGESO14684 152 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 ANP32DO95626 131 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 SESN2P58004 480 aaPredicted RBP24.6■■□□□ 1.53
CDK9-201ENST00000373264 FAM72AQ5TYM5 149 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 FAM72DQ6L9T8 149 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 CASC4Q6P4E1 433 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 CES3Q6UWW8 571 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 LONP2Q86WA8 852 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 FAM72BQ86X60 149 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 MCUQ8NE86 351 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 OLFM3Q96PB7 478 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 TMEM30AQ9NV96 361 aa24.6■■□□□ 1.53
CDK9-201ENST00000373264 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.59■■□□□ 1.53
CDK9-201ENST00000373264 I6L893 689 aaPredicted RBP24.59■■□□□ 1.53
CDK9-201ENST00000373264 HUS1O60921 280 aa24.59■■□□□ 1.53
CDK9-201ENST00000373264 DGKIO75912 1065 aa24.59■■□□□ 1.53
CDK9-201ENST00000373264 CD4P01730 458 aa24.59■■□□□ 1.53
CDK9-201ENST00000373264 DLDP09622 509 aaKnown RBP24.59■■□□□ 1.53
CDK9-201ENST00000373264 DESP17661 470 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms