RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 CTAGE15A4D2H0 777 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 TADA3O75528 432 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 RFPL2O75678 378 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 CTAGE8P0CG41 777 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 GABRR2P28476 465 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 EPHA5P54756 1037 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 TBX4P57082 545 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 TRIP4Q15650 581 aaPredicted RBP12.79□□□□□ -0.36
TUBE1-202ENST00000368662 LONRF2Q1L5Z9 754 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 SPOCD1Q6ZMY3 1216 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 CTAGE6Q86UF2 777 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 CTAGE4Q8IX94 777 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 CCDC185Q8N715 623 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 FAM71BQ8TC56 605 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 RAPGEF5Q92565 580 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 RNF25Q96BH1 459 aaPredicted RBP12.79□□□□□ -0.36
TUBE1-202ENST00000368662 MS4A14Q96JA4 679 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 CORO1BQ9BR76 489 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 ZNF670Q9BS34 389 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 LRRC3Q9BY71 257 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 OSBPL8Q9BZF1 889 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 PRKD2Q9BZL6 878 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 TKTL2Q9H0I9 626 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 ARHGEF38Q9NXL2 777 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 RCOR3Q9P2K3 495 aaPredicted RBP12.79□□□□□ -0.36
TUBE1-202ENST00000368662 SLC12A6Q9UHW9 1150 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 NUDT5Q9UKK9 219 aa12.79□□□□□ -0.36
TUBE1-202ENST00000368662 GOLGA6L10A0A0M3HER8 536 aa12.78□□□□□ -0.36
TUBE1-202ENST00000368662 SOBPA7XYQ1 873 aa12.78□□□□□ -0.36
TUBE1-202ENST00000368662 TJP3O95049 919 aa12.78□□□□□ -0.36
TUBE1-202ENST00000368662 SLU7O95391 586 aaKnown RBP12.78□□□□□ -0.36
TUBE1-202ENST00000368662 PAPLNO95428 1278 aa12.78□□□□□ -0.36
TUBE1-202ENST00000368662 TBX18O95935 607 aa12.78□□□□□ -0.36
TUBE1-202ENST00000368662 OAS1P00973 400 aaKnown RBP12.78□□□□□ -0.36
TUBE1-202ENST00000368662 APOEP02649 317 aa12.78□□□□□ -0.36
TUBE1-202ENST00000368662 TUBB4BP68371 445 aa12.78□□□□□ -0.36
TUBE1-202ENST00000368662 COG7P83436 770 aa12.78□□□□□ -0.36
TUBE1-202ENST00000368662 PDZD4Q76G19 769 aaPredicted RBP12.78□□□□□ -0.36
TUBE1-202ENST00000368662 TMEM150AQ86TG1 271 aa12.78□□□□□ -0.36
TUBE1-202ENST00000368662 SLC13A5Q86YT5 568 aaPredicted RBP12.78□□□□□ -0.36
TUBE1-202ENST00000368662 MIB1Q86YT6 1006 aa12.78□□□□□ -0.36
TUBE1-202ENST00000368662 SLC39A13Q96H72 371 aa12.78□□□□□ -0.36
TUBE1-202ENST00000368662 HAPLN3Q96S86 360 aa12.78□□□□□ -0.36
TUBE1-202ENST00000368662 CALN1Q9BXU9 219 aa12.78□□□□□ -0.36
TUBE1-202ENST00000368662 DHX35Q9H5Z1 703 aaKnown RBP12.78□□□□□ -0.36
TUBE1-202ENST00000368662 SFXN1Q9H9B4 322 aa12.78□□□□□ -0.36
TUBE1-202ENST00000368662 PRDM16Q9HAZ2 1276 aa12.78□□□□□ -0.36
TUBE1-202ENST00000368662 KLHL11Q9NVR0 708 aa12.78□□□□□ -0.36
TUBE1-202ENST00000368662 ZMYM5Q9UJ78 669 aa12.78□□□□□ -0.36
TUBE1-202ENST00000368662 MYO9BQ13459 2157 aa12.77□□□□□ -0.36
TUBE1-202ENST00000368662 C3orf70A6NLC5 250 aaPredicted RBP12.77□□□□□ -0.36
TUBE1-202ENST00000368662 PI4K2BG5E9Z4 385 aa12.77□□□□□ -0.36
TUBE1-202ENST00000368662 RFXAPO00287 272 aa12.77□□□□□ -0.36
TUBE1-202ENST00000368662 RIOK3O14730 519 aaKnown RBP12.77□□□□□ -0.36
TUBE1-202ENST00000368662 MSI1O43347 362 aaKnown RBP12.77□□□□□ -0.36
TUBE1-202ENST00000368662 COCHO43405 550 aa12.77□□□□□ -0.36
TUBE1-202ENST00000368662 DDX6P26196 483 aaKnown RBP eCLIP12.77□□□□□ -0.36
TUBE1-202ENST00000368662 ARL4AP40617 200 aa12.77□□□□□ -0.36
TUBE1-202ENST00000368662 CDKN2BP42772 138 aa12.77□□□□□ -0.36
TUBE1-202ENST00000368662 ARSEP51690 589 aa12.77□□□□□ -0.36
TUBE1-202ENST00000368662 KCNC3Q14003 757 aa12.77□□□□□ -0.36
TUBE1-202ENST00000368662 TAZQ16635 292 aa12.77□□□□□ -0.36
TUBE1-202ENST00000368662 ZC3H12AQ5D1E8 599 aaKnown RBP12.77□□□□□ -0.36
TUBE1-202ENST00000368662 NUGGCQ68CJ6 796 aa12.77□□□□□ -0.36
TUBE1-202ENST00000368662 MFSD7Q6UXD7 560 aa12.77□□□□□ -0.36
TUBE1-202ENST00000368662 GAREM2Q75VX8 874 aa12.77□□□□□ -0.36
TUBE1-202ENST00000368662 UNC45BQ8IWX7 931 aa12.77□□□□□ -0.36
TUBE1-202ENST00000368662 ACSF2Q96CM8 615 aaPredicted RBP12.77□□□□□ -0.36
TUBE1-202ENST00000368662 CARD6Q9BX69 1037 aa12.77□□□□□ -0.36
TUBE1-202ENST00000368662 MAK16Q9BXY0 300 aaKnown RBP12.77□□□□□ -0.36
TUBE1-202ENST00000368662 ATXN3LQ9H3M9 355 aa12.77□□□□□ -0.36
TUBE1-202ENST00000368662 CLUHO75153 1309 aa12.77□□□□□ -0.36
TUBE1-202ENST00000368662 hCG_1818297A0A087WSY0 165 aa12.77□□□□□ -0.37
TUBE1-202ENST00000368662 CCDC195A0A1B0GUA6 201 aa12.77□□□□□ -0.37
TUBE1-202ENST00000368662 SLC12A8A0AV02 714 aa12.77□□□□□ -0.37
TUBE1-202ENST00000368662 KRIT1O00522 736 aa12.77□□□□□ -0.37
TUBE1-202ENST00000368662 L1CAMP32004 1257 aa12.77□□□□□ -0.37
TUBE1-202ENST00000368662 DPYSL3Q14195 570 aa12.77□□□□□ -0.37
TUBE1-202ENST00000368662 PPP6R3Q5H9R7 873 aaPredicted RBP12.77□□□□□ -0.37
TUBE1-202ENST00000368662 AADACL2Q6P093 401 aa12.77□□□□□ -0.37
TUBE1-202ENST00000368662 TMEM184AQ6ZMB5 413 aa12.77□□□□□ -0.37
TUBE1-202ENST00000368662 ATP6V0D2Q8N8Y2 350 aa12.77□□□□□ -0.37
TUBE1-202ENST00000368662 SPATA4Q8NEY3 305 aa12.77□□□□□ -0.37
TUBE1-202ENST00000368662 OSBPL2Q9H1P3 480 aa12.77□□□□□ -0.37
TUBE1-202ENST00000368662 PCDH18Q9HCL0 1135 aa12.77□□□□□ -0.37
TUBE1-202ENST00000368662 KCNU1A8MYU2 1149 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 CCDC188H7C350 402 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 PDE2AO00408 941 aaPredicted RBP12.76□□□□□ -0.37
TUBE1-202ENST00000368662 ZNF197O14709 1029 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 OLFM2O95897 454 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 IGLV3-27P01718 113 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 MYL4P12829 197 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 HTR7P34969 479 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 TFDP2Q14188 446 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 CA9Q16790 459 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 ARHGAP15Q53QZ3 475 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 HS6ST3Q8IZP7 471 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 EFHBQ8N7U6 833 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 PLD4Q96BZ4 506 aa12.76□□□□□ -0.37
TUBE1-202ENST00000368662 FAF2Q96CS3 445 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms