RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 FUT11Q495W5 492 aa16.78■□□□□ 0.28
CKS1B-202ENST00000368436 ZNF658Q5TYW1 1059 aaPredicted RBP16.78■□□□□ 0.28
CKS1B-202ENST00000368436 DENND1CQ8IV53 801 aa16.78■□□□□ 0.28
CKS1B-202ENST00000368436 FMR1NBQ8N0W7 255 aaPredicted RBP16.78■□□□□ 0.28
CKS1B-202ENST00000368436 RBBP8NLQ8NC74 664 aaPredicted RBP16.78■□□□□ 0.28
CKS1B-202ENST00000368436 HSPA12BQ96MM6 686 aa16.78■□□□□ 0.28
CKS1B-202ENST00000368436 TMEM121BQ9BXQ6 578 aaPredicted RBP16.78■□□□□ 0.28
CKS1B-202ENST00000368436 SLC2A11Q9BYW1 496 aa16.78■□□□□ 0.28
CKS1B-202ENST00000368436 ULBP1Q9BZM6 244 aa16.78■□□□□ 0.28
CKS1B-202ENST00000368436 GDPD2Q9HCC8 539 aa16.78■□□□□ 0.28
CKS1B-202ENST00000368436 RMND1Q9NWS8 449 aa16.78■□□□□ 0.28
CKS1B-202ENST00000368436 STRIP2Q9ULQ0 834 aa16.78■□□□□ 0.28
CKS1B-202ENST00000368436 SLC12A8A0AV02 714 aa16.77■□□□□ 0.28
CKS1B-202ENST00000368436 TULP2O00295 520 aa16.77■□□□□ 0.28
CKS1B-202ENST00000368436 ARHGAP33O14559 1287 aa16.77■□□□□ 0.28
CKS1B-202ENST00000368436 XPO1O14980 1071 aaKnown RBP16.77■□□□□ 0.28
CKS1B-202ENST00000368436 SLC16A3O15427 465 aaKnown RBP16.77■□□□□ 0.28
CKS1B-202ENST00000368436 NDUFS2O75306 463 aa16.77■□□□□ 0.28
CKS1B-202ENST00000368436 TOP3BO95985 862 aaKnown RBP16.77■□□□□ 0.28
CKS1B-202ENST00000368436 CYBBP04839 570 aa16.77■□□□□ 0.28
CKS1B-202ENST00000368436 IL12RB1P42701 662 aa16.77■□□□□ 0.28
CKS1B-202ENST00000368436 ATXN3P54252 364 aaPredicted RBP16.77■□□□□ 0.28
CKS1B-202ENST00000368436 PDE4CQ08493 712 aa16.77■□□□□ 0.28
CKS1B-202ENST00000368436 CUL2Q13617 745 aa16.77■□□□□ 0.28
CKS1B-202ENST00000368436 STARD3Q14849 445 aa16.77■□□□□ 0.28
CKS1B-202ENST00000368436 TRIP4Q15650 581 aaPredicted RBP16.77■□□□□ 0.28
CKS1B-202ENST00000368436 GOLGA7BQ2TAP0 167 aa16.77■□□□□ 0.28
CKS1B-202ENST00000368436 ANKRD40Q6AI12 368 aa16.77■□□□□ 0.28
CKS1B-202ENST00000368436 RSRC2Q7L4I2 434 aaKnown RBP16.77■□□□□ 0.28
CKS1B-202ENST00000368436 PLD4Q96BZ4 506 aa16.77■□□□□ 0.28
CKS1B-202ENST00000368436 GSDMAQ96QA5 445 aa16.77■□□□□ 0.28
CKS1B-202ENST00000368436 GTPBP2Q9BX10 602 aaKnown RBP16.77■□□□□ 0.28
CKS1B-202ENST00000368436 PRDM16Q9HAZ2 1276 aa16.77■□□□□ 0.28
CKS1B-202ENST00000368436 ITM2CQ9NQX7 267 aa16.77■□□□□ 0.28
CKS1B-202ENST00000368436 USP36Q9P275 1121 aaKnown RBP16.77■□□□□ 0.28
CKS1B-202ENST00000368436 TSPAN16Q9UKR8 245 aa16.77■□□□□ 0.28
CKS1B-202ENST00000368436 CLEC4EQ9ULY5 219 aa16.77■□□□□ 0.28
CKS1B-202ENST00000368436 C1QTNF9BB2RNN3 333 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 C1QTNF9P0C862 333 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 CD6P30203 668 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 BCAT1P54687 386 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 FKBP3Q00688 224 aaKnown RBP16.76■□□□□ 0.27
CKS1B-202ENST00000368436 EIF4HQ15056 248 aaKnown RBP16.76■□□□□ 0.27
CKS1B-202ENST00000368436 E2F5Q15329 346 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 SGO2Q562F6 1265 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 DCAF17Q5H9S7 520 aaPredicted RBP16.76■□□□□ 0.27
CKS1B-202ENST00000368436 TCERG1LQ5VWI1 586 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 KIAA1324Q6UXG2 1013 aaKnown RBP16.76■□□□□ 0.27
CKS1B-202ENST00000368436 UNQ6494/PRO21346Q6UXR6 183 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 ANKS1BQ7Z6G8 1248 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 HDDC3Q8N4P3 179 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 UBR7Q8N806 425 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 KDF1Q8NAX2 398 aaPredicted RBP16.76■□□□□ 0.27
CKS1B-202ENST00000368436 SPATA20Q8TB22 786 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 UCMAQ8WVF2 138 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 NDRG1Q92597 394 aaKnown RBP16.76■□□□□ 0.27
CKS1B-202ENST00000368436 FOXJ1Q92949 421 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 TSG101Q99816 390 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 ADAM33Q9BZ11 813 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 MKRN2Q9H000 416 aaKnown RBP16.76■□□□□ 0.27
CKS1B-202ENST00000368436 OLA1Q9NTK5 396 aaKnown RBP16.76■□□□□ 0.27
CKS1B-202ENST00000368436 DNAAF2Q9NVR5 837 aaKnown RBP16.76■□□□□ 0.27
CKS1B-202ENST00000368436 ELOVL2Q9NXB9 296 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 KIAA1257Q9ULG3 409 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 CACNA1EQ15878 2313 aa16.76■□□□□ 0.27
CKS1B-202ENST00000368436 TIMM44O43615 452 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 OPHN1O60890 802 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 SYPP08247 313 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 SPINK2P20155 84 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 PMS1P54277 932 aaKnown RBP16.75■□□□□ 0.27
CKS1B-202ENST00000368436 YWHAEP62258 255 aaKnown RBP16.75■□□□□ 0.27
CKS1B-202ENST00000368436 BST2Q10589 180 aaKnown RBP16.75■□□□□ 0.27
CKS1B-202ENST00000368436 ZNF234Q14588 700 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 SYCP2LQ5T4T6 812 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 TMEM215Q68D42 235 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 RGL4Q8IZJ4 473 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 SCML4Q8N228 414 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 MINDY1Q8N5J2 469 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 ENGASEQ8NFI3 743 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 DDI1Q8WTU0 396 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 KCTD13Q8WZ19 329 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 DNASE2BQ8WZ79 361 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 SLC35C1Q96A29 364 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 SCNM1Q9BWG6 230 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 LRRC4Q9HBW1 653 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 WSB2Q9NYS7 404 aaPredicted RBP16.75■□□□□ 0.27
CKS1B-202ENST00000368436 SUSD2Q9UGT4 822 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 STOML2Q9UJZ1 356 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 HBS1LQ9Y450 684 aaKnown RBP16.75■□□□□ 0.27
CKS1B-202ENST00000368436 NFE2L3Q9Y4A8 694 aa16.75■□□□□ 0.27
CKS1B-202ENST00000368436 ZFHX4Q86UP3 3567 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 SPAARA0A1B0GVQ0 90 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 YJEFN3A6XGL0 299 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 KCNJ18B7U540 433 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 E7ENQ6 273 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 O00370 1275 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 GJB3O75712 270 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 IGLV3-19P01714 112 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 VDRP11473 427 aa16.74■□□□□ 0.27
CKS1B-202ENST00000368436 CD59P13987 128 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms