RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 IRX2Q9BZI1 471 aaPredicted RBP13.26□□□□□ -0.29
LMX1A-203ENST00000367893 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.26□□□□□ -0.29
LMX1A-203ENST00000367893 CA14Q9ULX7 337 aa13.26□□□□□ -0.29
LMX1A-203ENST00000367893 NAALADL1Q9UQQ1 740 aa13.26□□□□□ -0.29
LMX1A-203ENST00000367893 CAPN6Q9Y6Q1 641 aa13.26□□□□□ -0.29
LMX1A-203ENST00000367893 NRG2O14511 850 aaPredicted RBP13.25□□□□□ -0.29
LMX1A-203ENST00000367893 GFRA3O60609 400 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 PROSCO94903 275 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 FGF19O95750 216 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 IGLV3-25P01717 112 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 NCAM1P13591 858 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 RNASE9P60153 205 aaKnown RBP13.25□□□□□ -0.29
LMX1A-203ENST00000367893 SLC5A9Q2M3M2 681 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 PABPC1LQ4VXU2 614 aaKnown RBP13.25□□□□□ -0.29
LMX1A-203ENST00000367893 DCAF6Q58WW2 860 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 OTUD1Q5VV17 481 aaPredicted RBP13.25□□□□□ -0.29
LMX1A-203ENST00000367893 BTBD8Q5XKL5 378 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 KLHDC10Q6PID8 442 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 GAREM2Q75VX8 874 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 ASCL5Q7RTU5 278 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 HS6ST3Q8IZP7 471 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 TRIM58Q8NG06 486 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 ADAM33Q9BZ11 813 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 TBC1D17Q9HA65 648 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 ASAH2Q9NR71 780 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 ARHGEF3Q9NR81 526 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 TMEM51Q9NW97 253 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 TRPM5Q9NZQ8 1165 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 DLGAP2Q9P1A6 1054 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 STAP1Q9ULZ2 295 aa13.25□□□□□ -0.29
LMX1A-203ENST00000367893 DOCK8Q8NF50 2099 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 SOBPA7XYQ1 873 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 KIF5CO60282 957 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 ZNF500O60304 480 aaPredicted RBP13.24□□□□□ -0.29
LMX1A-203ENST00000367893 MOSPD3O75425 235 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 PALMO75781 387 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 RHOP08100 348 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 RALAP11233 206 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 RARGP13631 454 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 PFKLP17858 780 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 PSMA2P25787 234 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 MSNP26038 577 aaKnown RBP13.24□□□□□ -0.29
LMX1A-203ENST00000367893 CDC25CP30307 473 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 SDC4P31431 198 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 SLC1A1P43005 524 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 NAP1L1P55209 391 aaKnown RBP13.24□□□□□ -0.29
LMX1A-203ENST00000367893 MESDQ14696 234 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 PRSS36Q5K4E3 855 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 STRADAQ7RTN6 431 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 SYCE1Q8N0S2 351 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 ARFGAP1Q8N6T3 406 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 DQX1Q8TE96 717 aaKnown RBP13.24□□□□□ -0.29
LMX1A-203ENST00000367893 EDEM1Q92611 657 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 CFAP57Q96MR6 1250 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 CDK5RAP1Q96SZ6 601 aaKnown RBP13.24□□□□□ -0.29
LMX1A-203ENST00000367893 NCAPGQ9BPX3 1015 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 CORO1BQ9BR76 489 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 OLA1Q9NTK5 396 aaKnown RBP13.24□□□□□ -0.29
LMX1A-203ENST00000367893 ALG6Q9Y672 507 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 WDR87Q6ZQQ6 2873 aa13.24□□□□□ -0.29
LMX1A-203ENST00000367893 HELZP42694 1942 aaKnown RBP13.23□□□□□ -0.29
LMX1A-203ENST00000367893 PRR23AA6NEV1 266 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 ESPNB1AK53 854 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 CAPN9O14815 690 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 TLR5O60602 858 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 LRCH4O75427 683 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 OLFM2O95897 454 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 TRUB2O95900 331 aaKnown RBP13.23□□□□□ -0.29
LMX1A-203ENST00000367893 OAS1P00973 400 aaKnown RBP13.23□□□□□ -0.29
LMX1A-203ENST00000367893 TFE3P19532 575 aaPredicted RBP13.23□□□□□ -0.29
LMX1A-203ENST00000367893 GABRR2P28476 465 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 PCK1P35558 622 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 CCR2P41597 374 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 PITX1P78337 314 aaPredicted RBP13.23□□□□□ -0.29
LMX1A-203ENST00000367893 NNTQ13423 1086 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 ANGPT1Q15389 498 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 C15orf59Q2T9L4 293 aaPredicted RBP13.23□□□□□ -0.29
LMX1A-203ENST00000367893 HECTD3Q5T447 861 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 SH3PXD2AQ5TCZ1 1133 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 DAAM2Q86T65 1068 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 ING5Q8WYH8 240 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 CD101Q93033 1021 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 ALS2CR12Q96Q35 445 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 TBCBQ99426 244 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 CALCOCO1Q9P1Z2 691 aa13.23□□□□□ -0.29
LMX1A-203ENST00000367893 TUBB4AP04350 444 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 GLULP15104 373 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 CEBPBP17676 345 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 COMTP21964 271 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 SULT1E1P49888 294 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 HDAC4P56524 1084 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 STARD6P59095 220 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 ETF1P62495 437 aaKnown RBP13.22□□□□□ -0.29
LMX1A-203ENST00000367893 ATP11AP98196 1134 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 ZNF569Q5MCW4 686 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 MTSS1LQ765P7 747 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 TADA2BQ86TJ2 420 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 TAC4Q86UU9 113 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 NT5DC3Q86UY8 548 aa13.22□□□□□ -0.29
LMX1A-203ENST00000367893 SHKBP1Q8TBC3 707 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms