RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 CD101Q93033 1021 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 RTKNQ9BST9 563 aa15.32■□□□□ 0.04
SF3B5-201ENST00000367569 EML5Q05BV3 1969 aa15.31■□□□□ 0.04
SF3B5-201ENST00000367569 SLC9A3R1O14745 358 aaPredicted RBP15.31■□□□□ 0.04
SF3B5-201ENST00000367569 ADH1CP00326 375 aa15.31■□□□□ 0.04
SF3B5-201ENST00000367569 JAM2P57087 298 aa15.31■□□□□ 0.04
SF3B5-201ENST00000367569 PITX1P78337 314 aaPredicted RBP15.31■□□□□ 0.04
SF3B5-201ENST00000367569 NFKBIBQ15653 356 aa15.31■□□□□ 0.04
SF3B5-201ENST00000367569 CSRP2Q16527 193 aa15.31■□□□□ 0.04
SF3B5-201ENST00000367569 PRR23CQ6ZRP0 262 aa15.31■□□□□ 0.04
SF3B5-201ENST00000367569 TADA2BQ86TJ2 420 aa15.31■□□□□ 0.04
SF3B5-201ENST00000367569 HSFY1Q96LI6 401 aa15.31■□□□□ 0.04
SF3B5-201ENST00000367569 SPAG5Q96R06 1193 aa15.31■□□□□ 0.04
SF3B5-201ENST00000367569 SLC4A5Q9BY07 1137 aa15.31■□□□□ 0.04
SF3B5-201ENST00000367569 STK33Q9BYT3 514 aa15.31■□□□□ 0.04
SF3B5-201ENST00000367569 STRIP2Q9ULQ0 834 aa15.31■□□□□ 0.04
SF3B5-201ENST00000367569 PCDHGC3Q9UN70 934 aa15.31■□□□□ 0.04
SF3B5-201ENST00000367569 SLC8A2Q9UPR5 921 aa15.31■□□□□ 0.04
SF3B5-201ENST00000367569 NAALADL1Q9UQQ1 740 aa15.31■□□□□ 0.04
SF3B5-201ENST00000367569 CNOT1A5YKK6 2376 aaKnown RBP15.31■□□□□ 0.04
SF3B5-201ENST00000367569 SYNJ2BP-COX16A0A087WUM0 186 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.3■□□□□ 0.04
SF3B5-201ENST00000367569 GDF9O60383 454 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 TSPAN3O60637 253 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 ATG13O75143 517 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 FYNP06241 537 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 NCAM1P13591 858 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 DRD1P21728 446 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 SOX5P35711 763 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 NR1H3Q13133 447 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 SYPL2Q5VXT5 272 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 OR6B2Q6IFH4 312 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 KLHDC10Q6PID8 442 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 Q6ZNB5 142 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 PHLDB2Q86SQ0 1253 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 TAC4Q86UU9 113 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 ADGRG2Q8IZP9 1017 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 NETO1Q8TDF5 533 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 DQX1Q8TE96 717 aaKnown RBP15.3■□□□□ 0.04
SF3B5-201ENST00000367569 GAB3Q8WWW8 586 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 GOLGA1Q92805 767 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 ERLEC1Q96DZ1 483 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 PPP1R13BQ96KQ4 1090 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 NAP1L5Q96NT1 182 aaPredicted RBP15.3■□□□□ 0.04
SF3B5-201ENST00000367569 ERGIC2Q96RQ1 377 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 CDK5RAP1Q96SZ6 601 aaKnown RBP15.3■□□□□ 0.04
SF3B5-201ENST00000367569 SYNCQ9H7C4 482 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 SPHK2Q9NRA0 654 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 ABCC13Q9NSE7 274 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 COX16Q9P0S2 106 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 TBC1D14Q9P2M4 693 aa15.3■□□□□ 0.04
SF3B5-201ENST00000367569 CCDC163A0A0D9SF12 145 aa15.29■□□□□ 0.04
SF3B5-201ENST00000367569 AXIN1O15169 862 aa15.29■□□□□ 0.04
SF3B5-201ENST00000367569 RPP40O75818 363 aaKnown RBP15.29■□□□□ 0.04
SF3B5-201ENST00000367569 FBXO21O94952 628 aa15.29■□□□□ 0.04
SF3B5-201ENST00000367569 SERPINC1P01008 464 aa15.29■□□□□ 0.04
SF3B5-201ENST00000367569 NAA35Q5VZE5 725 aa15.29■□□□□ 0.04
SF3B5-201ENST00000367569 HTR3DQ70Z44 454 aa15.29■□□□□ 0.04
SF3B5-201ENST00000367569 KBTBD6Q86V97 674 aa15.29■□□□□ 0.04
SF3B5-201ENST00000367569 RPLP0P6Q8NHW5 317 aa15.29■□□□□ 0.04
SF3B5-201ENST00000367569 IRGQQ8WZA9 623 aa15.29■□□□□ 0.04
SF3B5-201ENST00000367569 DDX1Q92499 740 aaKnown RBP15.29■□□□□ 0.04
SF3B5-201ENST00000367569 HHIPQ96QV1 700 aa15.29■□□□□ 0.04
SF3B5-201ENST00000367569 BBS2Q9BXC9 721 aa15.29■□□□□ 0.04
SF3B5-201ENST00000367569 RTN4Q9NQC3 1192 aaKnown RBP15.29■□□□□ 0.04
SF3B5-201ENST00000367569 OLA1Q9NTK5 396 aaKnown RBP15.29■□□□□ 0.04
SF3B5-201ENST00000367569 SEPT11Q9NVA2 429 aaKnown RBP15.29■□□□□ 0.04
SF3B5-201ENST00000367569 NOCTQ9UK39 431 aaKnown RBP15.29■□□□□ 0.04
SF3B5-201ENST00000367569 AGO1Q9UL18 857 aaKnown RBP15.29■□□□□ 0.04
SF3B5-201ENST00000367569 CEP83Q9Y592 693 aa15.29■□□□□ 0.04
SF3B5-201ENST00000367569 ACACBO00763 2458 aa15.29■□□□□ 0.04
SF3B5-201ENST00000367569 EPG5Q9HCE0 2579 aa15.29■□□□□ 0.04
SF3B5-201ENST00000367569 GOLGA8SH3BPF8 625 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 CAPN9O14815 690 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 SLC30A4O14863 429 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 MOCS2O96007 188 aaPredicted RBP15.28■□□□□ 0.04
SF3B5-201ENST00000367569 CHRNB2P17787 502 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 ACADSBP45954 432 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 RPL34P49207 117 aaKnown RBP15.28■□□□□ 0.04
SF3B5-201ENST00000367569 SGSHP51688 502 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 COG7P83436 770 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 GAD2Q05329 585 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 CCDC6Q16204 474 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 MEA1Q16626 185 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 SKOR2Q2VWA4 1001 aaPredicted RBP15.28■□□□□ 0.04
SF3B5-201ENST00000367569 FBXO43Q4G163 708 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 MSANTD2Q6P1R3 559 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 TOGARAM2Q6ZUX3 1019 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 CACNA2D4Q7Z3S7 1137 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 SCML4Q8N228 414 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 CAMKK1Q8N5S9 505 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 RNF214Q8ND24 703 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 IPO4Q8TEX9 1081 aaKnown RBP15.28■□□□□ 0.04
SF3B5-201ENST00000367569 CPA5Q8WXQ8 436 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 PLD4Q96BZ4 506 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 ARRDC1-AS1Q9H2J1 176 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 FAM204AQ9H8W3 233 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 ARHGEF4Q9NR80 690 aa15.28■□□□□ 0.04
SF3B5-201ENST00000367569 DNAJC17Q9NVM6 304 aaKnown RBP15.28■□□□□ 0.04
SF3B5-201ENST00000367569 GOLGA6L7A0A1B0GV03 622 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms