RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 DDIT4Q9NX09 232 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 PCSK1NQ9UHG2 260 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 NUDT5Q9UKK9 219 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 SAR1BQ9Y6B6 198 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 TECTAO75443 2155 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 SYNJ2BP-COX16A0A087WUM0 186 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 ZNF840PA6NDX5 716 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 LOC730098B7Z3J9 87 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 KCNK3O14649 394 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 IRAK2O43187 625 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 TLR5O60602 858 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 IGLV3-25P01717 112 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 PTPN2P17706 415 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 GABRR2P28476 465 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 MARCKSL1P49006 195 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 RWDD2BP57060 319 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 AMPD2Q01433 879 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 CBX2Q14781 532 aaPredicted RBP21.47■■□□□ 1.03
SHISA4-201ENST00000362011 C10orf120Q5SQS8 335 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 ADAM32Q8TC27 787 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 SERPINB11Q96P15 392 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 PSMB7Q99436 277 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 CORO1BQ9BR76 489 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 PRKD2Q9BZL6 878 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 ZWILCHQ9H900 591 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 DZANK1Q9NVP4 752 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 DDX56Q9NY93 547 aaKnown RBP21.47■■□□□ 1.03
SHISA4-201ENST00000362011 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.47■■□□□ 1.03
SHISA4-201ENST00000362011 COX16Q9P0S2 106 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 CALCOCO1Q9P1Z2 691 aa21.47■■□□□ 1.03
SHISA4-201ENST00000362011 FGF19O95750 216 aa21.46■■□□□ 1.03
SHISA4-201ENST00000362011 MYL4P12829 197 aa21.46■■□□□ 1.03
SHISA4-201ENST00000362011 CDC25CP30307 473 aa21.46■■□□□ 1.03
SHISA4-201ENST00000362011 PEX5P50542 639 aa21.46■■□□□ 1.03
SHISA4-201ENST00000362011 TUBP50607 506 aa21.46■■□□□ 1.03
SHISA4-201ENST00000362011 ATXN1P54253 815 aaKnown RBP21.46■■□□□ 1.03
SHISA4-201ENST00000362011 KCNC3Q14003 757 aa21.46■■□□□ 1.03
SHISA4-201ENST00000362011 HECTD3Q5T447 861 aa21.46■■□□□ 1.03
SHISA4-201ENST00000362011 ZFYVE27Q5T4F4 411 aa21.46■■□□□ 1.03
SHISA4-201ENST00000362011 KATNAL2Q8IYT4 538 aa21.46■■□□□ 1.03
SHISA4-201ENST00000362011 PBKQ96KB5 322 aa21.46■■□□□ 1.03
SHISA4-201ENST00000362011 PEBP4Q96S96 227 aa21.46■■□□□ 1.03
SHISA4-201ENST00000362011 CCSER2Q9H7U1 834 aa21.46■■□□□ 1.03
SHISA4-201ENST00000362011 SFXN1Q9H9B4 322 aa21.46■■□□□ 1.03
SHISA4-201ENST00000362011 PIGVQ9NUD9 493 aa21.46■■□□□ 1.03
SHISA4-201ENST00000362011 SFMBT1Q9UHJ3 866 aa21.46■■□□□ 1.03
SHISA4-201ENST00000362011 RASAL2Q9UJF2 1139 aa21.46■■□□□ 1.03
SHISA4-201ENST00000362011 DOCK4Q8N1I0 1966 aa21.46■■□□□ 1.03
SHISA4-201ENST00000362011 CCDC195A0A1B0GUA6 201 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 CES2O00748 559 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 GLP2RO95838 553 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 SRGAP2BP0DMP2 458 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 IL1R2P27930 398 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 CXCR5P32302 372 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 EPHA5P54756 1037 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 RBM10P98175 930 aaKnown RBP21.45■■□□□ 1.02
SHISA4-201ENST00000362011 EFEMP1Q12805 493 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 TUBB2AQ13885 445 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 TXNRD3NBQ6F5E7 133 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 TMEM150AQ86TG1 271 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 FAM131BQ86XD5 332 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 LEMD2Q8NC56 503 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 VN1R2Q8NFZ6 395 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 TEKT4Q8WW24 435 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 MRPS31Q92665 395 aaKnown RBP21.45■■□□□ 1.02
SHISA4-201ENST00000362011 ALG3Q92685 438 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 TUBB2BQ9BVA1 445 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 CARD9Q9H257 536 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 WDR6Q9NNW5 1121 aaKnown RBP21.45■■□□□ 1.02
SHISA4-201ENST00000362011 HCFC1R1Q9NWW0 138 aa21.45■■□□□ 1.02
SHISA4-201ENST00000362011 MDM4O15151 490 aa21.44■■□□□ 1.02
SHISA4-201ENST00000362011 KRT1P04264 644 aa21.44■■□□□ 1.02
SHISA4-201ENST00000362011 ATP5C1P36542 298 aaKnown RBP21.44■■□□□ 1.02
SHISA4-201ENST00000362011 CXCR3P49682 368 aa21.44■■□□□ 1.02
SHISA4-201ENST00000362011 NNTQ13423 1086 aa21.44■■□□□ 1.02
SHISA4-201ENST00000362011 SMTNL2Q2TAL5 461 aa21.44■■□□□ 1.02
SHISA4-201ENST00000362011 BOLA3Q53S33 107 aa21.44■■□□□ 1.02
SHISA4-201ENST00000362011 ODF2Q5BJF6 829 aa21.44■■□□□ 1.02
SHISA4-201ENST00000362011 SEL1L2Q5TEA6 688 aa21.44■■□□□ 1.02
SHISA4-201ENST00000362011 KLHDC10Q6PID8 442 aa21.44■■□□□ 1.02
SHISA4-201ENST00000362011 CYP4V2Q6ZWL3 525 aaPredicted RBP21.44■■□□□ 1.02
SHISA4-201ENST00000362011 CMASQ8NFW8 434 aaPredicted RBP21.44■■□□□ 1.02
SHISA4-201ENST00000362011 SNRNP25Q9BV90 132 aaKnown RBP21.44■■□□□ 1.02
SHISA4-201ENST00000362011 NACA2Q9H009 215 aa21.44■■□□□ 1.02
SHISA4-201ENST00000362011 MARCH2Q9P0N8 246 aa21.44■■□□□ 1.02
SHISA4-201ENST00000362011 DNMT3BQ9UBC3 853 aaKnown RBP21.44■■□□□ 1.02
SHISA4-201ENST00000362011 DNMT3LQ9UJW3 386 aa21.44■■□□□ 1.02
SHISA4-201ENST00000362011 MSI1O43347 362 aaKnown RBP21.43■■□□□ 1.02
SHISA4-201ENST00000362011 SRGAP2O75044 1071 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 OAS1P00973 400 aaKnown RBP21.43■■□□□ 1.02
SHISA4-201ENST00000362011 RARAP10276 462 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 AIF1P55008 147 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 EIF4EBP2Q13542 120 aaPredicted RBP21.43■■□□□ 1.02
SHISA4-201ENST00000362011 TRIP4Q15650 581 aaPredicted RBP21.43■■□□□ 1.02
SHISA4-201ENST00000362011 ATP13A4Q4VNC1 1196 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 BRMS1LQ5PSV4 323 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 ERMARDQ5T6L9 678 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 DCAF12L1Q5VU92 463 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 GAREM2Q75VX8 874 aa21.43■■□□□ 1.02
SHISA4-201ENST00000362011 PDZD4Q76G19 769 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms