RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 CNTNAP5Q8WYK1 1306 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 TM9SF1O15321 606 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 FDX1P10109 184 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 ITGA9Q13797 1035 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 DGCR6Q14129 220 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 ACAP1Q15027 740 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 ZCCHC23Q6ZST2 131 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 MCRS1Q96EZ8 462 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 PDGFCQ9NRA1 345 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 TTC37Q6PGP7 1564 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 CFAP74Q9C0B2 1584 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 TBX3O15119 743 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 DYRK3O43781 588 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 TSPAN3O60637 253 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 CYP11B1P15538 503 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 MPP3Q13368 585 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 FAM131BQ86XD5 332 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 MARK4Q96L34 752 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 TBCDQ9BTW9 1192 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 TCF7L2Q9NQB0 619 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 PRMT7Q9NVM4 692 aaPredicted RBP16.43■□□□□ 0.22
COL18A1-203ENST00000359759 MYL12AP19105 171 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 CELF6Q96J87 481 aaKnown RBP16.43■□□□□ 0.22
COL18A1-203ENST00000359759 NSMCE2Q96MF7 247 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 CROTQ9UKG9 612 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 LOC100506127A0A0U1RQW1 187 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 CNPP09543 421 aaKnown RBP16.43■□□□□ 0.22
COL18A1-203ENST00000359759 SLC26A11Q86WA9 606 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 EHD3Q9NZN3 535 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 NCKIPSDQ9NZQ3 722 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 COPG2Q9UBF2 871 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 PPIEQ9UNP9 301 aaKnown RBP16.43■□□□□ 0.22
COL18A1-203ENST00000359759 AP4E1Q9UPM8 1137 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 JCHAINP01591 159 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 RARGP13631 454 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 CDC42EP5Q6NZY7 148 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 CDC73Q6P1J9 531 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.43■□□□□ 0.22
COL18A1-203ENST00000359759 KBTBD2Q8IY47 623 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 FRMD8Q9BZ67 464 aaPredicted RBP16.43■□□□□ 0.22
COL18A1-203ENST00000359759 BTBD7Q9P203 1132 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 GTF3C4Q9UKN8 822 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 MYRFQ9Y2G1 1151 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 KDM6BO15054 1643 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 NUDT14O95848 222 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 UMPSP11172 480 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 GCLCP48506 637 aaPredicted RBP16.43■□□□□ 0.22
COL18A1-203ENST00000359759 CLEC17AQ6ZS10 378 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 OXNAD1Q96HP4 312 aaPredicted RBP16.43■□□□□ 0.22
COL18A1-203ENST00000359759 ERAP1Q9NZ08 941 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 ACOT9Q9Y305 439 aa16.43■□□□□ 0.22
COL18A1-203ENST00000359759 CBX4O00257 560 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 PIK3CDO00329 1044 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 VTNP04004 478 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 ENO2P09104 434 aaPredicted RBP16.42■□□□□ 0.22
COL18A1-203ENST00000359759 PUDPQ08623 228 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 PROSER1Q86XN7 944 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 PARP8Q8N3A8 854 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 FBXO25Q8TCJ0 367 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 PRKAG3Q9UGI9 489 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 RAD54BQ9Y620 910 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 PDE9AO76083 593 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 MPOP05164 745 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 ZNF37AP17032 561 aaPredicted RBP16.42■□□□□ 0.22
COL18A1-203ENST00000359759 ERGIC2Q96RQ1 377 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 CCDC3Q9BQI4 270 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 RSPH9Q9H1X1 276 aaPredicted RBP16.42■□□□□ 0.22
COL18A1-203ENST00000359759 MID1IP1Q9NPA3 183 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 NDUFAF1Q9Y375 327 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 CYB561D2O14569 222 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 CRTAMO95727 393 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 RBP1P09455 135 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 RPA1P27694 616 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 FXR2P51116 673 aaKnown RBP eCLIP16.42■□□□□ 0.224e-7■■■■□ 23.8
COL18A1-203ENST00000359759 TAF1CQ15572 869 aaPredicted RBP16.42■□□□□ 0.22
COL18A1-203ENST00000359759 ZNF544Q6NX49 715 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 BDH2Q9BUT1 245 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 TOR4AQ9NXH8 423 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 CCDC167Q9P0B6 97 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 SEC22BO75396 215 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 GLI1P08151 1106 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 PAICSP22234 425 aaKnown RBP16.42■□□□□ 0.22
COL18A1-203ENST00000359759 PDK2Q15119 407 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 ZCCHC8Q6NZY4 707 aaKnown RBP16.42■□□□□ 0.22
COL18A1-203ENST00000359759 ADGRF2Q8IZF7 708 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 SIX5Q8N196 739 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 MOSPD2Q8NHP6 518 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 PYDC1Q8WXC3 89 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 VPS28Q9UK41 221 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 TNFAIP8O95379 198 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 CYP2F1P24903 491 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 TRMT5Q32P41 509 aaKnown RBP16.42■□□□□ 0.22
COL18A1-203ENST00000359759 EFCAB6Q5THR3 1501 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 APOL4Q9BPW4 351 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 VAV3Q9UKW4 847 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 POLR1DQ9Y2S0 133 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 RRN3P2A6NIE6 340 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 OR6B1O95007 311 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 CBX6O95503 412 aa16.42■□□□□ 0.22
COL18A1-203ENST00000359759 THPOP40225 353 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms