RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 SNX10Q9Y5X0 201 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 GOLGA6L7A0A1B0GV03 622 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 TCRBV7S3A2A0A539 114 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 DPYSL4O14531 572 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 GNRH1P01148 92 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 CCL5P13501 91 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 GOT1P17174 413 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 RPL34P49207 117 aaKnown RBP13.12□□□□□ -0.31
GGPS1-202ENST00000358966 GPR15P49685 360 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 CDK7P50613 346 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 YWHAZP63104 245 aaKnown RBP13.12□□□□□ -0.31
GGPS1-202ENST00000358966 GBE1Q04446 702 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 TAZQ16635 292 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 KYNUQ16719 465 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 LRRC23Q53EV4 343 aaPredicted RBP13.12□□□□□ -0.31
GGPS1-202ENST00000358966 FAXCQ5TGI0 409 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 ANKRD22Q5VYY1 191 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 TP53INP2Q8IXH6 220 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 TMEM86AQ8N2M4 240 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 EIF1ADQ8N9N8 165 aaKnown RBP13.12□□□□□ -0.31
GGPS1-202ENST00000358966 SLC7A14Q8TBB6 771 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.12□□□□□ -0.31
GGPS1-202ENST00000358966 EPS8L3Q8TE67 593 aaKnown RBP13.12□□□□□ -0.31
GGPS1-202ENST00000358966 MAK16Q9BXY0 300 aaKnown RBP13.12□□□□□ -0.31
GGPS1-202ENST00000358966 MTRF1LQ9UGC7 380 aaKnown RBP13.12□□□□□ -0.31
GGPS1-202ENST00000358966 NUP205Q92621 2012 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 HHLA1C9JL84 531 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 ATP6V1G1O75348 118 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 NCAM1P13591 858 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 MATKP42679 507 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 KRT71Q3SY84 523 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 ANKRD20A8PQ5CZ79 823 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 INTS6LQ5JSJ4 861 aaKnown RBP13.12□□□□□ -0.31
GGPS1-202ENST00000358966 COLGALT2Q8IYK4 626 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 RNF157Q96PX1 679 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 TSC22D3Q99576 134 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 PAK6Q9NQU5 681 aaPredicted RBP13.12□□□□□ -0.31
GGPS1-202ENST00000358966 ABI2Q9NYB9 513 aaPredicted RBP13.12□□□□□ -0.31
GGPS1-202ENST00000358966 CDH9Q9ULB4 789 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 EYSQ5T1H1 3165 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 DNM1LO00429 736 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 L1CAMP32004 1257 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 PTPN7P35236 360 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 ARPP19P56211 112 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 YWHAHQ04917 246 aaPredicted RBP13.11□□□□□ -0.31
GGPS1-202ENST00000358966 IFFO1Q0D2I5 559 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 SLC10A2Q12908 348 aaPredicted RBP13.11□□□□□ -0.31
GGPS1-202ENST00000358966 SLC39A12Q504Y0 691 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 CCDC89Q8N998 374 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 PHACTR1Q9C0D0 580 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 PABPC3Q9H361 631 aaKnown RBP13.11□□□□□ -0.31
GGPS1-202ENST00000358966 FAM72CH0Y354 149 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 APOC4-APOC2K7ER74 178 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 M0QZQ0 153 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 ENPP3O14638 875 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 CAPN9O14815 690 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 CREB3O43889 395 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 ENDOD1O94919 500 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 APOC2P02655 101 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 RPLP2P05387 115 aaKnown RBP13.11□□□□□ -0.31
GGPS1-202ENST00000358966 AMPD1P23109 780 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 PCSK1P29120 753 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 ACADSBP45954 432 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 DAOAP59103 153 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 DSC1Q08554 894 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 ACAP1Q15027 740 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 ERMARDQ5T6L9 678 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 ACBD5Q5T8D3 534 aaPredicted RBP13.11□□□□□ -0.31
GGPS1-202ENST00000358966 FAM72AQ5TYM5 149 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 FAM72DQ6L9T8 149 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 BHLHA9Q7RTU4 235 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 FAM72BQ86X60 149 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 ZDHHC17Q8IUH5 632 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 NKD2Q969F2 451 aaPredicted RBP13.11□□□□□ -0.31
GGPS1-202ENST00000358966 SMARCD1Q96GM5 515 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 RUNDC3BQ96NL0 473 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 GORASP1Q9BQQ3 440 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 CEP41Q9BYV8 373 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 GPR62Q9BZJ7 368 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 WHRNQ9P202 907 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 CTNNAL1Q9UBT7 734 aa13.11□□□□□ -0.31
GGPS1-202ENST00000358966 H7C0C1 242 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 RIPK2O43353 540 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 PTPN9P43378 593 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 ATP5OP48047 213 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 LONRF1Q17RB8 773 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 DENND2CQ68D51 928 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 METTL23Q86XA0 190 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 SCN4BQ8IWT1 228 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 RSAD2Q8WXG1 361 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.1□□□□□ -0.31
GGPS1-202ENST00000358966 CENPIQ92674 756 aaPredicted RBP13.1□□□□□ -0.31
GGPS1-202ENST00000358966 P3H4Q92791 437 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 SUSD3Q96L08 255 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 PKMYT1Q99640 499 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 EBF2Q9HAK2 575 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 NLRC5Q86WI3 1866 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.1□□□□□ -0.31
GGPS1-202ENST00000358966 MCF2LO15068 1137 aa13.1□□□□□ -0.31
GGPS1-202ENST00000358966 OPA1O60313 960 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms