RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 DESP17661 470 aa16.57■□□□□ 0.24
PTPN5-201ENST00000358540 STIP1P31948 543 aaKnown RBP16.57■□□□□ 0.24
PTPN5-201ENST00000358540 FOXN2P32314 431 aa16.57■□□□□ 0.24
PTPN5-201ENST00000358540 CLCNKBP51801 687 aa16.57■□□□□ 0.24
PTPN5-201ENST00000358540 PAQR9Q6ZVX9 377 aa16.57■□□□□ 0.24
PTPN5-201ENST00000358540 LMNTD2Q8IXW0 634 aa16.57■□□□□ 0.24
PTPN5-201ENST00000358540 C3orf58Q8NDZ4 430 aa16.57■□□□□ 0.24
PTPN5-201ENST00000358540 STK32AQ8WU08 396 aa16.57■□□□□ 0.24
PTPN5-201ENST00000358540 CKAP2Q8WWK9 683 aa16.57■□□□□ 0.24
PTPN5-201ENST00000358540 CEP41Q9BYV8 373 aa16.57■□□□□ 0.24
PTPN5-201ENST00000358540 RHOBTB2Q9BYZ6 727 aa16.57■□□□□ 0.24
PTPN5-201ENST00000358540 CCDC134Q9H6E4 229 aa16.57■□□□□ 0.24
PTPN5-201ENST00000358540 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.57■□□□□ 0.24
PTPN5-201ENST00000358540 FAM47DPA6NHR8 397 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 M0QZ92 97 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 PTPN1P18031 435 aaKnown RBP16.56■□□□□ 0.24
PTPN5-201ENST00000358540 RPA3P35244 121 aaPredicted RBP16.56■□□□□ 0.24
PTPN5-201ENST00000358540 SCNN1GP51170 649 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 SLC9A4Q6AI14 798 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 GSTCDQ8NEC7 633 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 TRIB2Q92519 343 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 TNIP3Q96KP6 325 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 PPP1R10Q96QC0 940 aaKnown RBP16.56■□□□□ 0.24
PTPN5-201ENST00000358540 TSPYL2Q9H2G4 693 aaPredicted RBP16.56■□□□□ 0.24
PTPN5-201ENST00000358540 KRT82Q9NSB4 513 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 DDX43Q9NXZ2 648 aaKnown RBP16.56■□□□□ 0.24
PTPN5-201ENST00000358540 PSMC3IPQ9P2W1 217 aaPredicted RBP16.56■□□□□ 0.24
PTPN5-201ENST00000358540 MDM4O15151 490 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 GEMIN4P57678 1058 aaKnown RBP16.56■□□□□ 0.24
PTPN5-201ENST00000358540 ROR2Q01974 943 aaKnown RBP16.56■□□□□ 0.24
PTPN5-201ENST00000358540 KCNJ11Q14654 390 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 SYPL2Q5VXT5 272 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 SPATA21Q7Z572 469 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 MFN1Q8IWA4 741 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 HASPINQ8TF76 798 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 SENP8Q96LD8 212 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 CSPG4P5Q96PW8 444 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 SYT15Q9BQS2 421 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 AGO3Q9H9G7 860 aaKnown RBP16.56■□□□□ 0.24
PTPN5-201ENST00000358540 ZFYVE28Q9HCC9 887 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 FAM105AQ9NUU6 356 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 ARL2BPQ9Y2Y0 163 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 CHRNA1P02708 482 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 CA4P22748 312 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 PTPN9P43378 593 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 SNX16P57768 344 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 SMYD5Q6GMV2 418 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 ARHGEF18Q6ZSZ5 1173 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 ASRGL1Q7L266 308 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 ZDHHC17Q8IUH5 632 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 RMDN2Q96LZ7 410 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 SMC6Q96SB8 1091 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 KCNK16Q96T55 309 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 ZNF670Q9BS34 389 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 C11orf84Q9BUA3 381 aaPredicted RBP16.56■□□□□ 0.24
PTPN5-201ENST00000358540 GRID1Q9ULK0 1009 aa16.56■□□□□ 0.24
PTPN5-201ENST00000358540 H0Y3Z8 333 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 OAS1P00973 400 aaKnown RBP16.55■□□□□ 0.24
PTPN5-201ENST00000358540 KRT4P19013 534 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 TGM2P21980 687 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 PHBP35232 272 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 CCNG1P51959 295 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 CACNA2D1P54289 1103 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 EFHC2Q5JST6 749 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 RIBC1Q8N443 379 aaPredicted RBP16.55■□□□□ 0.24
PTPN5-201ENST00000358540 SOCS4Q8WXH5 440 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 DUSP16Q9BY84 665 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 LRRC4Q9HBW1 653 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 CRTAC1Q9NQ79 661 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 PIH1D1Q9NWS0 290 aaKnown RBP16.55■□□□□ 0.24
PTPN5-201ENST00000358540 MYBPHLA2RUH7 354 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 CREB3O43889 395 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 METTL18O95568 372 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 NPR3P17342 541 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 SLC1A5Q15758 541 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 SMAD1Q15797 465 aaKnown RBP16.55■□□□□ 0.24
PTPN5-201ENST00000358540 TAF2Q6P1X5 1199 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 TMEM154Q6P9G4 183 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 KCNT2Q6UVM3 1135 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 CLEC20AQ6ZU45 233 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 LONP2Q86WA8 852 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 RXFP1Q9HBX9 757 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 TMEM30AQ9NV96 361 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 GTF2IRD1Q9UHL9 959 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 TRPV2Q9Y5S1 764 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 ZNF236Q9UL36 1845 aa16.55■□□□□ 0.24
PTPN5-201ENST00000358540 WDR91A4D1P6 747 aa16.54■□□□□ 0.24
PTPN5-201ENST00000358540 E7ESA3 106 aa16.54■□□□□ 0.24
PTPN5-201ENST00000358540 XPO1O14980 1071 aaKnown RBP16.54■□□□□ 0.24
PTPN5-201ENST00000358540 WARSP23381 471 aaKnown RBP16.54■□□□□ 0.24
PTPN5-201ENST00000358540 DNAJC3Q13217 504 aa16.54■□□□□ 0.24
PTPN5-201ENST00000358540 DPYSL2Q16555 572 aa16.54■□□□□ 0.24
PTPN5-201ENST00000358540 GPRIN1Q7Z2K8 1008 aa16.54■□□□□ 0.24
PTPN5-201ENST00000358540 NME8Q8N427 588 aa16.54■□□□□ 0.24
PTPN5-201ENST00000358540 LGMNQ99538 433 aa16.54■□□□□ 0.24
PTPN5-201ENST00000358540 MTG1Q9BT17 334 aaPredicted RBP16.54■□□□□ 0.24
PTPN5-201ENST00000358540 PAK5Q9P286 719 aa16.54■□□□□ 0.24
PTPN5-201ENST00000358540 NRP1O14786 923 aa16.54■□□□□ 0.24
PTPN5-201ENST00000358540 DUSP11O75319 330 aaKnown RBP16.54■□□□□ 0.24
PTPN5-201ENST00000358540 FAM155BO75949 473 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms