RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ARHGAP26Q9UNA1 814 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 MYH9P35579 1960 aaKnown RBP6.78□□□□□ -1.32
CSDE1-203ENST00000358528 SPATA31A6Q5VVP1 1343 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 MAFGO15525 162 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 CLPTM1O96005 669 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 BPGMP07738 259 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 PMLP29590 882 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 SERPINB9P50453 376 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 SLC12A2P55011 1212 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 ACAP1Q15027 740 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 RARS2Q5T160 578 aaKnown RBP6.78□□□□□ -1.32
CSDE1-203ENST00000358528 DCAF15Q66K64 600 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 MARK2Q7KZI7 788 aaKnown RBP6.78□□□□□ -1.32
CSDE1-203ENST00000358528 WDTC1Q8N5D0 677 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 ZNF280CQ8ND82 737 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 SHKBP1Q8TBC3 707 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 SEPT1Q8WYJ6 367 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 SPATA33Q96N06 139 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 CATSPER2Q96P56 530 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 TWNKQ96RR1 684 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 LGMNQ99538 433 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 SNRNP25Q9BV90 132 aaKnown RBP6.78□□□□□ -1.32
CSDE1-203ENST00000358528 MRIQ9BWK5 157 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 DEFB129Q9H1M3 183 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 TASP1Q9H6P5 420 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 KRT82Q9NSB4 513 aa6.78□□□□□ -1.32
CSDE1-203ENST00000358528 TBC1D12O60347 775 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 PGK2P07205 417 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 CPA3P15088 417 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 TPH1P17752 444 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 FGFR3P22607 806 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 FSTL1Q12841 308 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 KRT72Q14CN4 511 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 PDK3Q15120 406 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 CA9Q16790 459 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 CNPY1Q3B7I2 92 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 LIN52Q52LA3 116 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 TMCO4Q5TGY1 634 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 DRICH1Q6PGQ1 229 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-203ENST00000358528 SATL1Q86VE3 508 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 SNX32Q86XE0 403 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 XYLT1Q86Y38 959 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 RELL1Q8IUW5 271 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 COLGALT1Q8NBJ5 622 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 EME1Q96AY2 570 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 KCNK16Q96T55 309 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 CDRT15Q96T59 188 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 SEMA6AQ9H2E6 1030 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 WDR55Q9H6Y2 383 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-203ENST00000358528 CAAP1Q9H8G2 361 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 CAB39LQ9H9S4 337 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 FARP1Q9Y4F1 1045 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-203ENST00000358528 MYOCOSA0A1B0GUC4 107 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 LACTBL1A8MY62 500 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 TPST1O60507 370 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 GLRA3O75311 464 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 OR6B1O95007 311 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 METTL18O95568 372 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 SP2Q02086 613 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 SLC25A11Q02978 314 aaKnown RBP6.77□□□□□ -1.33
CSDE1-203ENST00000358528 CXCL9Q07325 125 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 SEPT6Q14141 434 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 NOMO1Q15155 1222 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 NRF1Q16656 503 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 BOLA3Q53S33 107 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 HSP90AA5PQ58FG0 334 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 JADE1Q6IE81 842 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 ABHD15Q6UXT9 468 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 PLD5Q8N7P1 536 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 AZIN2Q96A70 460 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 OPTNQ96CV9 577 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 PIWIL1Q96J94 861 aaKnown RBP6.77□□□□□ -1.33
CSDE1-203ENST00000358528 TRAPPC9Q96Q05 1148 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 PHF12Q96QT6 1004 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 NT5C1AQ9BXI3 368 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 MAGEB5Q9BZ81 275 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 NUF2Q9BZD4 464 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 SUDS3Q9H7L9 328 aaPredicted RBP6.77□□□□□ -1.33
CSDE1-203ENST00000358528 KCNK13Q9HB14 408 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 S100A14Q9HCY8 104 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 XPNPEP3Q9NQH7 507 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 CYTH4Q9UIA0 394 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 RPL26L1Q9UNX3 145 aaKnown RBP6.77□□□□□ -1.33
CSDE1-203ENST00000358528 ZNF711Q9Y462 761 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 SMAPO00193 183 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 CHADO15335 359 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 HNRNPRO43390 633 aaKnown RBP6.77□□□□□ -1.33
CSDE1-203ENST00000358528 SERPINA6P08185 405 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 STAG3L1P0CL83 205 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 DLG1Q12959 904 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 TMEM132DQ14C87 1099 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 Q3C1V9 767 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 SFT2D3Q587I9 215 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 DCAF6Q58WW2 860 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 ANGEL2Q5VTE6 544 aaKnown RBP6.77□□□□□ -1.33
CSDE1-203ENST00000358528 MPZL3Q6UWV2 235 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 ACAD11Q709F0 780 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 STRA8Q7Z7C7 330 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 CHSY1Q86X52 802 aa6.77□□□□□ -1.33
CSDE1-203ENST00000358528 RYBPQ8N488 228 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms