RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 NOD2Q9HC29 1040 aa16.39■□□□□ 0.21
PHTF1-201ENST00000357783 FZD10Q9ULW2 581 aa16.39■□□□□ 0.21
PHTF1-201ENST00000357783 STK38LQ9Y2H1 464 aa16.39■□□□□ 0.21
PHTF1-201ENST00000357783 USP3Q9Y6I4 520 aa16.39■□□□□ 0.21
PHTF1-201ENST00000357783 PTGESO14684 152 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 MFSD11O43934 449 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 SLC8A3P57103 927 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 SLC18A2Q05940 514 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 SH2D5Q6ZV89 423 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 ASRGL1Q7L266 308 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 TFB1MQ8WVM0 346 aaKnown RBP16.38■□□□□ 0.21
PHTF1-201ENST00000357783 MYCBPQ99417 103 aaPredicted RBP16.38■□□□□ 0.21
PHTF1-201ENST00000357783 HNRNPABQ99729 332 aaKnown RBP16.38■□□□□ 0.21
PHTF1-201ENST00000357783 MED10Q9BTT4 135 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 MANSC1Q9H8J5 431 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 DCTN4Q9UJW0 460 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 MEIS3P2A8K0S8 358 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 UNC5CO95185 931 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 APOEP02649 317 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 NEFHP12036 1026 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 NPR3P17342 541 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 PTPN1P18031 435 aaKnown RBP16.38■□□□□ 0.21
PHTF1-201ENST00000357783 BMPR2Q13873 1038 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 MDH1BQ5I0G3 518 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 OTUD1Q5VV17 481 aaPredicted RBP16.38■□□□□ 0.21
PHTF1-201ENST00000357783 TRMT10BQ6PF06 316 aaKnown RBP16.38■□□□□ 0.21
PHTF1-201ENST00000357783 C4orf22Q6V702 233 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 TOP6BLQ8N6T0 577 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 ARHGEF4Q9NR80 690 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 ARHGEF3Q9NR81 526 aa16.38■□□□□ 0.21
PHTF1-201ENST00000357783 DAB1O75553 588 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 DCTN3O75935 186 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 CSH1P0DML2 217 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 CSH2P0DML3 217 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 RARBP10826 455 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 CCNB1P14635 433 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 TPSB2P20231 275 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 PRKCHP24723 683 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 TARSP26639 723 aaKnown RBP16.37■□□□□ 0.21
PHTF1-201ENST00000357783 MAGEA3P43357 314 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 CBLBQ13191 982 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 NME3Q13232 169 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 TPSAB1Q15661 275 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 PAQR9Q6ZVX9 377 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 CEP57Q86XR8 500 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 HTR3CQ8WXA8 447 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 SIGLEC10Q96LC7 697 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 LRRC4Q9HBW1 653 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 COPEO14579 308 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 KRT37O76014 449 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 SNRPAP09012 282 aaKnown RBP16.37■□□□□ 0.21
PHTF1-201ENST00000357783 ETV4P43268 484 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 MRPS5P82675 430 aaKnown RBP16.37■□□□□ 0.21
PHTF1-201ENST00000357783 SIX6OS1Q8N1H7 587 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 RFWD2Q8NHY2 731 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 LRRC39Q96DD0 335 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 OLFM3Q96PB7 478 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 EBNA1BP2Q99848 306 aaKnown RBP16.37■□□□□ 0.21
PHTF1-201ENST00000357783 CEP41Q9BYV8 373 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 IQCGQ9H095 443 aaKnown RBP16.37■□□□□ 0.21
PHTF1-201ENST00000357783 TXLNGQ9NUQ3 528 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 GTF2IRD1Q9UHL9 959 aa16.37■□□□□ 0.21
PHTF1-201ENST00000357783 A8MUI8 341 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 M0QYT0 321 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 TRDMT1O14717 391 aaKnown RBP16.36■□□□□ 0.21
PHTF1-201ENST00000357783 CREB3O43889 395 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 DGKIO75912 1065 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 TROVE2P10155 538 aaKnown RBP eCLIP16.36■□□□□ 0.21
PHTF1-201ENST00000357783 BGNP21810 368 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 MAP3K7CLP57077 242 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 FSCN1Q16658 493 aaKnown RBP16.36■□□□□ 0.21
PHTF1-201ENST00000357783 PLEKHG4Q58EX7 1191 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 ANKRD20A2Q5SQ80 823 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 ANKRD20A1Q5TYW2 823 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 ANKRD20A3Q5VUR7 823 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 KIAA0319Q5VV43 1072 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 SYPL2Q5VXT5 272 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 CDHR3Q6ZTQ4 885 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 HFE2Q6ZVN8 426 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 NLRP9Q7RTR0 991 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 RNF139Q8WU17 664 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 SRPK1Q96SB4 655 aaKnown RBP16.36■□□□□ 0.21
PHTF1-201ENST00000357783 PIH1D1Q9NWS0 290 aaKnown RBP16.36■□□□□ 0.21
PHTF1-201ENST00000357783 A0A0A0MRY4 1105 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 DHRS4L1P0CG22 281 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 SKIV2L2P42285 1042 aaKnown RBP16.36■□□□□ 0.21
PHTF1-201ENST00000357783 AP1B1Q10567 949 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 SEMA5AQ13591 1074 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 CLEC20AQ6ZU45 233 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 GSDMBQ8TAX9 411 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 TBC1D31Q96DN5 1066 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 SPATA13Q96N96 652 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 TMEM237Q96Q45 408 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 PPP1R10Q96QC0 940 aaKnown RBP16.36■□□□□ 0.21
PHTF1-201ENST00000357783 TSPAN18Q96SJ8 248 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 KATNAL1Q9BW62 490 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 TSSK1BQ9BXA7 367 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 XAB2Q9HCS7 855 aaKnown RBP16.36■□□□□ 0.21
PHTF1-201ENST00000357783 KRT82Q9NSB4 513 aa16.36■□□□□ 0.21
PHTF1-201ENST00000357783 SEPT10Q9P0V9 454 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms