RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 LEFTY2O00292 366 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 PAMP19021 973 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 DGKGP49619 791 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 USP4Q13107 963 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 SEPT7Q16181 437 aaKnown RBP9.52□□□□□ -0.89
UPF2-202ENST00000357604 DNAJC21Q5F1R6 531 aaKnown RBP9.52□□□□□ -0.89
UPF2-202ENST00000357604 KRT35Q92764 455 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 KXD1Q9BQD3 176 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 TKTL2Q9H0I9 626 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 FBRSQ9HAH7 460 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 CHST7Q9NS84 486 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 DNAJC17Q9NVM6 304 aaKnown RBP9.52□□□□□ -0.89
UPF2-202ENST00000357604 SGK1O00141 431 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 RAMP2O60895 175 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 ABLIM3O94929 683 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 TGM2P21980 687 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 NRLP54845 237 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 DAOAP59103 153 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 CENPCQ03188 943 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 AP1B1Q10567 949 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 NNTQ13423 1086 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 GTF2H3Q13889 308 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 TJAP1Q5JTD0 557 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 RASIP1Q5U651 963 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 STRADAQ7RTN6 431 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 ADAT2Q7Z6V5 191 aaKnown RBP9.52□□□□□ -0.89
UPF2-202ENST00000357604 PCGF5Q86SE9 256 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 ZSWIM2Q8NEG5 633 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 SREK1Q8WXA9 508 aaKnown RBP9.52□□□□□ -0.89
UPF2-202ENST00000357604 OR8D1Q8WZ84 308 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 SAMD15Q9P1V8 674 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 HCFC2Q9Y5Z7 792 aa9.52□□□□□ -0.89
UPF2-202ENST00000357604 MYH15Q9Y2K3 1946 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 HIDE1A8MVS5 230 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 GABRDO14764 452 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 EPHB2P29323 1055 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 PRKCQQ04759 706 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 SLC20A2Q08357 652 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 PSTKQ8IV42 348 aaKnown RBP9.51□□□□□ -0.89
UPF2-202ENST00000357604 EPS8L1Q8TE68 723 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 SLC20A1Q8WUM9 679 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 DNASE1L2Q92874 299 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 KLC2Q9H0B6 622 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 NDRG2Q9UN36 371 aaKnown RBP9.51□□□□□ -0.89
UPF2-202ENST00000357604 RHOAP61586 193 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 PEX6Q13608 980 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 ASIC4Q96FT7 647 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 IKZF4Q9H2S9 585 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 CRTAC1Q9NQ79 661 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 USP18Q9UMW8 372 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 ZNF148Q9UQR1 794 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 MTCH2Q9Y6C9 303 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 ZSWIM8A7E2V4 1837 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 ABLIM1O14639 778 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 ECI2O75521 394 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 OR1E1P30953 314 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 SLC12A1Q13621 1099 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 FBXO43Q4G163 708 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 CHST9Q7L1S5 443 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 C16orf59Q7L2K0 433 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 SLC26A9Q7LBE3 791 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 AHI1Q8N157 1196 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 OR10T2Q8NGX3 314 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 ARID3AQ99856 593 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 JRKLQ9Y4A0 524 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 MEIS3P2A8K0S8 358 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 RFXAPO00287 272 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 MAGEC1O60732 1142 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 MAPKAPK2P49137 400 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 DYNLT1P63172 113 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 NOMO3P69849 1222 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 NCAPHQ15003 741 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 TAS1R1Q7RTX1 841 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 KIAA1958Q8N8K9 716 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 FLCNQ8NFG4 579 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 IER2Q9BTL4 223 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 FUCA2Q9BTY2 467 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 ATP13A1Q9HD20 1204 aa9.51□□□□□ -0.89
UPF2-202ENST00000357604 GYPCP04921 128 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 JAM2P57087 298 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 KDSRQ06136 332 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 HYAL1Q12794 435 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 P3H1Q32P28 736 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 CNPY4Q8N129 248 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 C12orf76Q8N812 135 aaPredicted RBP9.5□□□□□ -0.89
UPF2-202ENST00000357604 ATP11CQ8NB49 1132 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 TSTD1Q8NFU3 115 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 CASKIN2Q8WXE0 1202 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 A0A1W2PQ67 120 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 HEPACAM2A8MVW5 462 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 PROSCO94903 275 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 DNTTP04053 509 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 CYP1A2P05177 515 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 MYZAPP0CAP1 466 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 TACR2P21452 398 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 SNRPD1P62314 119 aaKnown RBP9.5□□□□□ -0.89
UPF2-202ENST00000357604 SYCP2LQ5T4T6 812 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 MAATS1Q7Z4T9 603 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 ELSPBP1Q96BH3 223 aa9.5□□□□□ -0.89
UPF2-202ENST00000357604 KREMEN1Q96MU8 473 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms