RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 HDAC7Q8WUI4 952 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 OVCA2Q8WZ82 227 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 CALN1Q9BXU9 219 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 CCSER2Q9H7U1 834 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 ZNF334Q9HCZ1 680 aaPredicted RBP18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 EFR3BQ9Y2G0 817 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 DOCK6Q96HP0 2047 aa18.84■□□□□ 0.61
SMARCD3-202ENST00000356800 ZNF840PA6NDX5 716 aa18.84■□□□□ 0.61
SMARCD3-202ENST00000356800 RAD51CO43502 376 aa18.84■□□□□ 0.61
SMARCD3-202ENST00000356800 CLASP2O75122 1294 aaKnown RBP18.84■□□□□ 0.61
SMARCD3-202ENST00000356800 PHF2O75151 1096 aa18.84■□□□□ 0.61
SMARCD3-202ENST00000356800 C8AP07357 584 aa18.84■□□□□ 0.61
SMARCD3-202ENST00000356800 GBP1P32455 592 aa18.84■□□□□ 0.61
SMARCD3-202ENST00000356800 BMP8BP34820 402 aa18.84■□□□□ 0.61
SMARCD3-202ENST00000356800 MRPS25P82663 173 aaKnown RBP18.84■□□□□ 0.61
SMARCD3-202ENST00000356800 SCAPQ12770 1279 aa18.84■□□□□ 0.61
SMARCD3-202ENST00000356800 RAB30Q15771 203 aa18.84■□□□□ 0.61
SMARCD3-202ENST00000356800 MAATS1Q7Z4T9 603 aa18.84■□□□□ 0.61
SMARCD3-202ENST00000356800 CCDC26Q8TAB7 109 aa18.84■□□□□ 0.61
SMARCD3-202ENST00000356800 ZNF512Q96ME7 567 aaPredicted RBP18.84■□□□□ 0.61
SMARCD3-202ENST00000356800 WDCPQ9H6R7 721 aa18.84■□□□□ 0.61
SMARCD3-202ENST00000356800 DMGDHQ9UI17 866 aaKnown RBP18.84■□□□□ 0.61
SMARCD3-202ENST00000356800 MSRAQ9UJ68 235 aa18.84■□□□□ 0.61
SMARCD3-202ENST00000356800 EPOPA6NHQ4 379 aa18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 TLR5O60602 858 aa18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 AIF1P55008 147 aa18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 VSNL1P62760 191 aa18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 EFEMP1Q12805 493 aa18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 PPP6R3Q5H9R7 873 aaPredicted RBP18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 C10orf120Q5SQS8 335 aa18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 PPP2R2DQ66LE6 453 aa18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 CCDC149Q6ZUS6 474 aa18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 SND1Q7KZF4 910 aaKnown RBP eCLIP18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 TMEM150AQ86TG1 271 aa18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 PDZD8Q8NEN9 1154 aa18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 FAF2Q96CS3 445 aa18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 RUNDC3BQ96NL0 473 aa18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 TKTL2Q9H0I9 626 aa18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 LRRC19Q9H756 370 aa18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 HOMER3Q9NSC5 361 aa18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 PCYOX1Q9UHG3 505 aa18.83■□□□□ 0.61
SMARCD3-202ENST00000356800 LPXNO60711 386 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 TJP3O95049 919 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 FNTAP49354 379 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 TAF12Q16514 161 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 PDE12Q6L8Q7 609 aaKnown RBP18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 TTC27Q6P3X3 843 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 BBS12Q6ZW61 710 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 VSIG1Q86XK7 387 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 MAP7D3Q8IWC1 876 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 ZNF276Q8N554 614 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 PCDH19Q8TAB3 1148 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 SLC22A17Q8WUG5 538 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 HNRNPLLQ8WVV9 542 aaKnown RBP18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 C1orf54Q8WWF1 131 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 ARNTL2Q8WYA1 636 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 ATG4AQ8WYN0 398 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 SLC39A13Q96H72 371 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 SERPINB11Q96P15 392 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 RNF157Q96PX1 679 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 ZNF670Q9BS34 389 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 IL21Q9HBE4 155 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 OLA1Q9NTK5 396 aaKnown RBP18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 ARHGEF38Q9NXL2 777 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 CWC15Q9P013 229 aaKnown RBP18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 AMACRQ9UHK6 382 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 ZNF487B1APH4 448 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 FAM72CH0Y354 149 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 CST8O60676 142 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 EPCAMP16422 314 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 SLC7A5Q01650 507 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 SEMA3BQ13214 749 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 DHX34Q14147 1143 aaKnown RBP18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 ANKRD20A8PQ5CZ79 823 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 EFHC2Q5JST6 749 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 FAM72AQ5TYM5 149 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 FAM72DQ6L9T8 149 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 ADGRD2Q7Z7M1 963 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 ITIH5Q86UX2 942 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 FAM72BQ86X60 149 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 RFX6Q8HWS3 928 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 TDHQ8IZJ6 230 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 PQLC3Q8N755 202 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 GDPD5Q8WTR4 605 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 RNF34Q969K3 372 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 MAGOHBQ96A72 148 aaKnown RBP18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 FCRL2Q96LA5 508 aaPredicted RBP18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 FAM118BQ9BPY3 351 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 LRRC3Q9BY71 257 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 DCLK3Q9C098 648 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 TRPM5Q9NZQ8 1165 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 MARCH2Q9P0N8 246 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 TLR6Q9Y2C9 796 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 ASB3Q9Y575 518 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 SNX10Q9Y5X0 201 aa18.82■□□□□ 0.6
SMARCD3-202ENST00000356800 KCNU1A8MYU2 1149 aa18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 PER2O15055 1255 aa18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 HEXIM1O94992 359 aaKnown RBP18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 LRG1P02750 347 aa18.81■□□□□ 0.6
SMARCD3-202ENST00000356800 F11P03951 625 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms