RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 RNF19BQ6ZMZ0 732 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 TMEM79Q9BSE2 394 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 C2orf49Q9BVC5 232 aaPredicted RBP16.21■□□□□ 0.19
RTN3-205ENST00000356000 IRF2BPLQ9H1B7 796 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 CNNM1Q9NRU3 951 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 APEX2Q9UBZ4 518 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 ARHGAP33O14559 1287 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 SNNO75324 88 aaPredicted RBP16.21■□□□□ 0.19
RTN3-205ENST00000356000 ZNF182P17025 639 aaPredicted RBP16.21■□□□□ 0.19
RTN3-205ENST00000356000 HSPA14Q0VDF9 509 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 MGAT5BQ3V5L5 792 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 TMEM26Q6ZUK4 368 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 GSTA5Q7RTV2 222 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 OSCP1Q8WVF1 389 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 ZNF347Q96SE7 839 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 ZBTB3Q9H5J0 574 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 SIRPGQ9P1W8 387 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 ARIH1Q9Y4X5 557 aaPredicted RBP16.21■□□□□ 0.19
RTN3-205ENST00000356000 IKBKGQ9Y6K9 419 aa16.21■□□□□ 0.19
RTN3-205ENST00000356000 ZSCAN5BA6NJL1 495 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 ZNF839A8K0R7 811 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 S100A5P33763 92 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 HPCAL1P37235 193 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 TRAF2Q12933 501 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 DPYSQ14117 519 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 ARHGAP44Q17R89 818 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 GJC2Q5T442 439 aaPredicted RBP16.2■□□□□ 0.18
RTN3-205ENST00000356000 SLX4IPQ5VYV7 408 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 CIAPIN1Q6FI81 312 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 TRIM72Q6ZMU5 477 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 TAS2R42Q7RTR8 314 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 PDPRQ8NCN5 879 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 TRIB2Q92519 343 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 MECRQ9BV79 373 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 STN1Q9H668 368 aaKnown RBP16.2■□□□□ 0.18
RTN3-205ENST00000356000 RMND5AQ9H871 391 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 NUAK1O60285 661 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 ZC3H11AO75152 810 aaKnown RBP eCLIP16.2■□□□□ 0.181e-7■■■■□ 20.8
RTN3-205ENST00000356000 PIAS1O75925 651 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 FKBP9O95302 570 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 MCF2P10911 925 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 GZMAP12544 262 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 SSTR1P30872 391 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 FMO5P49326 533 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 P2RX3P56373 397 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 OTUD4Q01804 1114 aaKnown RBP16.2■□□□□ 0.18
RTN3-205ENST00000356000 ZNF746Q6NUN9 644 aaPredicted RBP16.2■□□□□ 0.18
RTN3-205ENST00000356000 KIF6Q6ZMV9 814 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 FRMD7Q6ZUT3 714 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 CYP4V2Q6ZWL3 525 aaPredicted RBP16.2■□□□□ 0.18
RTN3-205ENST00000356000 KIAA2013Q8IYS2 634 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 GIPC2Q8TF65 315 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 NAP1L4Q99733 375 aaKnown RBP16.2■□□□□ 0.18
RTN3-205ENST00000356000 DHRS9Q9BPW9 319 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 FAM118BQ9BPY3 351 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 ISCA1Q9BUE6 129 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 ANKRD60Q9BZ19 345 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 SHCBP1LQ9BZQ2 653 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 PCDH12Q9NPG4 1184 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 SCUBE2Q9NQ36 999 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 CCDC177Q9NQR7 707 aaPredicted RBP16.2■□□□□ 0.18
RTN3-205ENST00000356000 MRGBPQ9NV56 204 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 THG1LQ9NWX6 298 aaKnown RBP16.2■□□□□ 0.18
RTN3-205ENST00000356000 GDAP2Q9NXN4 497 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 PCDHGA8Q9Y5G5 932 aa16.2■□□□□ 0.18
RTN3-205ENST00000356000 IQANK1A0A1B0GTG1 560 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 TRIM64A6NGJ6 449 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 TSPY2A6NKD2 308 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 FAM155AB1AL88 458 aaPredicted RBP16.19■□□□□ 0.18
RTN3-205ENST00000356000 HOXC11O43248 304 aaPredicted RBP16.19■□□□□ 0.18
RTN3-205ENST00000356000 SLC37A4O43826 429 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 TMCC2O75069 709 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 SPAG6O75602 509 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 GABBR2O75899 941 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 CLPXO76031 633 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 TSPY3P0CV98 308 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 TSPY8P0CW00 308 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 GLRA2P23416 452 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 EIF3EP60228 445 aaKnown RBP16.19■□□□□ 0.18
RTN3-205ENST00000356000 TSPY1Q01534 308 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 FAAP100Q0VG06 881 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 PMS2P3Q13401 168 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 CHI3L2Q15782 390 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 ABCB5Q2M3G0 1257 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 C15orf59Q2T9L4 293 aaPredicted RBP16.19■□□□□ 0.18
RTN3-205ENST00000356000 DALRD3Q5D0E6 543 aaKnown RBP16.19■□□□□ 0.18
RTN3-205ENST00000356000 FAM47CQ5HY64 1035 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 FAM47AQ5JRC9 791 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 HYIQ5T013 277 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 SLC30A10Q6XR72 485 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 GPBP1Q86WP2 473 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 ACMSDQ8TDX5 336 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 PCDHB18PQ96TA0 734 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 INTS2Q9H0H0 1204 aaKnown RBP16.19■□□□□ 0.18
RTN3-205ENST00000356000 NANOGQ9H9S0 305 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 C12orf10Q9HB07 376 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 ZMAT5Q9UDW3 170 aaKnown RBP16.19■□□□□ 0.18
RTN3-205ENST00000356000 BCAP29Q9UHQ4 241 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 ARHGAP26Q9UNA1 814 aa16.19■□□□□ 0.18
RTN3-205ENST00000356000 FAM172BPA6NC97 362 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms