RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 MIA3Q5JRA6 1907 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 WASH4PA8MWX3 477 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 NRP1O14786 923 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 NCAM2O15394 837 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 DDHD2O94830 711 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 TSPAN15O95858 294 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 ESR1P03372 595 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 CCDC175P0C221 793 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 KRT13P13646 458 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 TFE3P19532 575 aaPredicted RBP7.43□□□□□ -1.22
VPS13A-201ENST00000355766 CD72P21854 359 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 LIMK1P53667 647 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 NPEPPSP55786 919 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 PEX3P56589 373 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 LRMPQ12912 555 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 BFSP1Q12934 665 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 STRN3Q13033 797 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 MTAPQ13126 283 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 SYCP1Q15431 976 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 KYAT1Q16773 422 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 HSP90AA4PQ58FG1 418 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 MEI1Q5TIA1 1274 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 SLC6A19Q695T7 634 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 IL31Q6EBC2 164 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 TWF2Q6IBS0 349 aaKnown RBP7.43□□□□□ -1.22
VPS13A-201ENST00000355766 UNQ6494/PRO21346Q6UXR6 183 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 GBP6Q6ZN66 633 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 SYDE1Q6ZW31 735 aaPredicted RBP7.43□□□□□ -1.22
VPS13A-201ENST00000355766 FAM186BQ8IYM0 893 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 CCAR2Q8N163 923 aaKnown RBP7.43□□□□□ -1.22
VPS13A-201ENST00000355766 DEPTORQ8TB45 409 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 CCDC120Q96HB5 630 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 IER2Q9BTL4 223 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 MYO1AQ9UBC5 1043 aa7.43□□□□□ -1.22
VPS13A-201ENST00000355766 CACNA1IQ9P0X4 2223 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 SSU72P8A0A1W2PR75 194 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 TTC26A0AVF1 554 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 HNRNPDLO14979 420 aaKnown RBP7.42□□□□□ -1.22
VPS13A-201ENST00000355766 TGM5O43548 720 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 EXOC3O60645 756 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 ZNF623O75123 536 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 CSDE1O75534 798 aaKnown RBP7.42□□□□□ -1.22
VPS13A-201ENST00000355766 GFPT2O94808 682 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 IPO7O95373 1038 aaKnown RBP7.42□□□□□ -1.22
VPS13A-201ENST00000355766 EFEMP2O95967 443 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 LDHAP00338 332 aaKnown RBP7.42□□□□□ -1.22
VPS13A-201ENST00000355766 CCDC172P0C7W6 258 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 C1QTNF9P0C862 333 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 SPATA31D3P0C874 917 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 GLRA2P23416 452 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 CFPP27918 469 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 CASP14P31944 242 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 KRT9P35527 623 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 AP3M2P53677 418 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 DSG1Q02413 1049 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 ADCY1Q08828 1119 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 PPP2R5DQ14738 602 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 FAM187BQ17R55 369 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 EXOC3L4Q17RC7 722 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 TSNAXIP1Q2TAA8 658 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 MTERF2Q49AM1 385 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 RALGPS1Q5JS13 557 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 SPATA31D4Q6ZUB0 917 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 TAS1R1Q7RTX1 841 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 TRMT1LQ7Z2T5 733 aaKnown RBP7.42□□□□□ -1.22
VPS13A-201ENST00000355766 ZNF410Q86VK4 478 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 MCATQ8IVS2 390 aaKnown RBP7.42□□□□□ -1.22
VPS13A-201ENST00000355766 ZBTB8OSQ8IWT0 167 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 NEK11Q8NG66 645 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 DNAJB8Q8NHS0 232 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 PIWIL2Q8TC59 973 aaKnown RBP7.42□□□□□ -1.22
VPS13A-201ENST00000355766 PGBD4Q96DM1 585 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 Q96M66 194 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 DIRC2Q96SL1 478 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 NELL2Q99435 816 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 GCOM2Q9BZD3 368 aaPredicted RBP7.42□□□□□ -1.22
VPS13A-201ENST00000355766 RSAD1Q9HA92 442 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 LUC7LQ9NQ29 371 aaKnown RBP7.42□□□□□ -1.22
VPS13A-201ENST00000355766 HSPBP1Q9NZL4 362 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 PYCARDQ9ULZ3 195 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 FAN1Q9Y2M0 1017 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 MRPS17Q9Y2R5 130 aaKnown RBP7.42□□□□□ -1.22
VPS13A-201ENST00000355766 PRG3Q9Y2Y8 225 aaPredicted RBP7.42□□□□□ -1.22
VPS13A-201ENST00000355766 BZW2Q9Y6E2 419 aaKnown RBP7.42□□□□□ -1.22
VPS13A-201ENST00000355766 CNTNAP2Q9UHC6 1331 aa7.42□□□□□ -1.22
VPS13A-201ENST00000355766 FASNP49327 2511 aaKnown RBP7.41□□□□□ -1.22
VPS13A-201ENST00000355766 DOCK8Q8NF50 2099 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 SHISA7A6NL88 538 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 CCDC169A6NNP5 214 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 PES1O00541 588 aaKnown RBP7.41□□□□□ -1.22
VPS13A-201ENST00000355766 SLC16A4O15374 487 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 EXTL3O43909 919 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 TOM1L1O75674 476 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 LCA5LO95447 670 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 KRT1P04264 644 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 ALDH2P05091 517 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 CYLC1P35663 651 aaPredicted RBP7.41□□□□□ -1.22
VPS13A-201ENST00000355766 ETV3P41162 512 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 FMO5P49326 533 aa7.41□□□□□ -1.22
VPS13A-201ENST00000355766 CCR3P51677 355 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms