RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 P2RY2P41231 377 aa17.48■□□□□ 0.39
PDLIM7-201ENST00000355572 PITX1P78337 314 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-201ENST00000355572 LMNB2Q03252 620 aa17.48■□□□□ 0.39
PDLIM7-201ENST00000355572 MIIPQ5JXC2 388 aa17.48■□□□□ 0.39
PDLIM7-201ENST00000355572 EOGTQ5NDL2 527 aa17.48■□□□□ 0.39
PDLIM7-201ENST00000355572 MSANTD2Q6P1R3 559 aa17.48■□□□□ 0.39
PDLIM7-201ENST00000355572 SIX6OS1Q8N1H7 587 aa17.48■□□□□ 0.39
PDLIM7-201ENST00000355572 WDTC1Q8N5D0 677 aa17.48■□□□□ 0.39
PDLIM7-201ENST00000355572 GPR161Q8N6U8 529 aaKnown RBP17.48■□□□□ 0.39
PDLIM7-201ENST00000355572 WFDC5Q8TCV5 224 aa17.48■□□□□ 0.39
PDLIM7-201ENST00000355572 IPO9Q96P70 1041 aaKnown RBP17.48■□□□□ 0.39
PDLIM7-201ENST00000355572 WDR35Q9P2L0 1181 aa17.48■□□□□ 0.39
PDLIM7-201ENST00000355572 IGLV3-27P01718 113 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 LTFP02788 710 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 HOXB2P14652 356 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 HOXD9P28356 352 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 SLC6A4P31645 630 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 GBP1P32455 592 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 SLC8A3P57103 927 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 ARHGAP44Q17R89 818 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 HSF5Q4G112 596 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 NADSYN1Q6IA69 706 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 CLEC17AQ6ZS10 378 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 DGLUCYQ7Z3D6 616 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 TADA2BQ86TJ2 420 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 SCUBE3Q8IX30 993 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 CPXM2Q8N436 756 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 ZNF606Q8WXB4 792 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 SORCS1Q8WY21 1168 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 PLD4Q96BZ4 506 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 LOXL4Q96JB6 756 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 XPO6Q96QU8 1125 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 CDK5RAP1Q96SZ6 601 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 NAALADL1Q9UQQ1 740 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 GON4LQ3T8J9 2241 aa17.47■□□□□ 0.39
PDLIM7-201ENST00000355572 PCDH15Q96QU1 1955 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 BCLAF3A2AJT9 711 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 PAPSS1O43252 624 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 LETM1O95202 739 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 ZNF806P0C7X5 589 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 NDUFV2P19404 249 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 NTSR1P30989 418 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 IL12RB1P42701 662 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 KCNMA1Q12791 1236 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 SYPL2Q5VXT5 272 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 ERMP1Q7Z2K6 904 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 DEFB119Q8N690 84 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 MLKLQ8NB16 471 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 GPT2Q8TD30 523 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 GABRG3Q99928 467 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 SLC4A5Q9BY07 1137 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 DCLK3Q9C098 648 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 ABCC13Q9NSE7 274 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 SAMSN1Q9NSI8 373 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 CALCOCO1Q9P1Z2 691 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 STRIP2Q9ULQ0 834 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 SLC27A6Q9Y2P4 619 aa17.46■□□□□ 0.39
PDLIM7-201ENST00000355572 NUMA1Q14980 2115 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 FAM170AA1A519 330 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 E5RJQ4 531 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 PTGER3P43115 390 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 CREB5Q02930 508 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 CETN1Q12798 172 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 TAF5Q15542 800 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 FAM133BQ5BKY9 247 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 RFWD3Q6PCD5 774 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 ARMCX6Q7L4S7 300 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 TMEFF1Q8IYR6 380 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 CCDC26Q8TAB7 109 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 ADAM32Q8TC27 787 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 DQX1Q8TE96 717 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 IPO4Q8TEX9 1081 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 RNF139Q8WU17 664 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 IRGQQ8WZA9 623 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 SHC3Q92529 594 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 FCRL2Q96LA5 508 aaPredicted RBP17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 HSFY1Q96LI6 401 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 NUP62CLQ9H1M0 184 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 POLMQ9NP87 494 aaPredicted RBP17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 OLA1Q9NTK5 396 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 TMEM74BQ9NUR3 256 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 BCCIPQ9P287 314 aaKnown RBP eCLIP17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 XPO7Q9UIA9 1087 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 STOML2Q9UJZ1 356 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 CDV3Q9UKY7 258 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 ZNF510Q9Y2H8 683 aa17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 HBS1LQ9Y450 684 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 ATXN2Q99700 1313 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-201ENST00000355572 PRR5-ARHGAP8B1AHC4 643 aa17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 SLC30A4O14863 429 aa17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 THAP12O43422 761 aa17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 HLA-FP30511 346 aa17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 GNA15P30679 374 aa17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 CHKAP35790 457 aa17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 MTIF2P46199 727 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 ARHGAP8P85298 464 aa17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 ENPP2Q13822 863 aa17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 STILQ15468 1287 aa17.44■□□□□ 0.38
PDLIM7-201ENST00000355572 USP39Q53GS9 565 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms