RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 ZNF419Q96HQ0 510 aaPredicted RBP16.64■□□□□ 0.25
PDGFA-201ENST00000354513 FAXDC2Q96IV6 333 aa16.64■□□□□ 0.25
PDGFA-201ENST00000354513 HEXIM2Q96MH2 286 aaKnown RBP16.64■□□□□ 0.25
PDGFA-201ENST00000354513 SCNM1Q9BWG6 230 aa16.64■□□□□ 0.25
PDGFA-201ENST00000354513 ULBP1Q9BZM6 244 aa16.64■□□□□ 0.25
PDGFA-201ENST00000354513 UBXN6Q9BZV1 441 aa16.64■□□□□ 0.25
PDGFA-201ENST00000354513 MKRN2Q9H000 416 aaKnown RBP16.64■□□□□ 0.25
PDGFA-201ENST00000354513 USP36Q9P275 1121 aaKnown RBP16.64■□□□□ 0.25
PDGFA-201ENST00000354513 THAP10Q9P2Z0 257 aaPredicted RBP16.64■□□□□ 0.25
PDGFA-201ENST00000354513 RALYQ9UKM9 306 aaKnown RBP16.64■□□□□ 0.25
PDGFA-201ENST00000354513 COQ4Q9Y3A0 265 aa16.64■□□□□ 0.25
PDGFA-201ENST00000354513 NUMA1Q14980 2115 aa16.63■□□□□ 0.25
PDGFA-201ENST00000354513 ZNF217O75362 1048 aa16.63■□□□□ 0.25
PDGFA-201ENST00000354513 CD59P13987 128 aa16.63■□□□□ 0.25
PDGFA-201ENST00000354513 TRIM21P19474 475 aaKnown RBP16.63■□□□□ 0.25
PDGFA-201ENST00000354513 PRCPP42785 496 aa16.63■□□□□ 0.25
PDGFA-201ENST00000354513 COPAP53621 1224 aa16.63■□□□□ 0.25
PDGFA-201ENST00000354513 YWHAGP61981 247 aaKnown RBP eCLIP16.63■□□□□ 0.25
PDGFA-201ENST00000354513 GOLGA7BQ2TAP0 167 aa16.63■□□□□ 0.25
PDGFA-201ENST00000354513 PM20D1Q6GTS8 502 aa16.63■□□□□ 0.25
PDGFA-201ENST00000354513 DENND1CQ8IV53 801 aa16.63■□□□□ 0.25
PDGFA-201ENST00000354513 CPXM2Q8N436 756 aa16.63■□□□□ 0.25
PDGFA-201ENST00000354513 MINDY1Q8N5J2 469 aa16.63■□□□□ 0.25
PDGFA-201ENST00000354513 ANKRD52Q8NB46 1076 aa16.63■□□□□ 0.25
PDGFA-201ENST00000354513 CEP76Q8TAP6 659 aa16.63■□□□□ 0.25
PDGFA-201ENST00000354513 GTPBP2Q9BX10 602 aaKnown RBP16.63■□□□□ 0.25
PDGFA-201ENST00000354513 ARHGAP33O14559 1287 aa16.62■□□□□ 0.25
PDGFA-201ENST00000354513 HYAL3O43820 417 aaPredicted RBP16.62■□□□□ 0.25
PDGFA-201ENST00000354513 GABBR2O75899 941 aa16.62■□□□□ 0.25
PDGFA-201ENST00000354513 PRKCHP24723 683 aa16.62■□□□□ 0.25
PDGFA-201ENST00000354513 TKTL1P51854 596 aa16.62■□□□□ 0.25
PDGFA-201ENST00000354513 COG7P83436 770 aa16.62■□□□□ 0.25
PDGFA-201ENST00000354513 PDE4CQ08493 712 aa16.62■□□□□ 0.25
PDGFA-201ENST00000354513 TRIP4Q15650 581 aaPredicted RBP16.62■□□□□ 0.25
PDGFA-201ENST00000354513 SDE2Q6IQ49 451 aa16.62■□□□□ 0.25
PDGFA-201ENST00000354513 KIAA1324Q6UXG2 1013 aaKnown RBP16.62■□□□□ 0.25
PDGFA-201ENST00000354513 TADA2BQ86TJ2 420 aa16.62■□□□□ 0.25
PDGFA-201ENST00000354513 METTL3Q86U44 580 aaKnown RBP16.62■□□□□ 0.25
PDGFA-201ENST00000354513 FMR1NBQ8N0W7 255 aaPredicted RBP16.62■□□□□ 0.25
PDGFA-201ENST00000354513 KDF1Q8NAX2 398 aaPredicted RBP16.62■□□□□ 0.25
PDGFA-201ENST00000354513 CCDC150Q8NCX0 1101 aa16.62■□□□□ 0.25
PDGFA-201ENST00000354513 SORCS1Q8WY21 1168 aa16.62■□□□□ 0.25
PDGFA-201ENST00000354513 CDK5RAP1Q96SZ6 601 aaKnown RBP16.62■□□□□ 0.25
PDGFA-201ENST00000354513 DNAAF2Q9NVR5 837 aaKnown RBP16.62■□□□□ 0.25
PDGFA-201ENST00000354513 MARCH2Q9P0N8 246 aa16.62■□□□□ 0.25
PDGFA-201ENST00000354513 TSPAN16Q9UKR8 245 aa16.62■□□□□ 0.25
PDGFA-201ENST00000354513 ZMIZ1Q9ULJ6 1067 aa16.62■□□□□ 0.25
PDGFA-201ENST00000354513 ZNF510Q9Y2H8 683 aa16.62■□□□□ 0.25
PDGFA-201ENST00000354513 DMXL2Q8TDJ6 3036 aa16.61■□□□□ 0.25
PDGFA-201ENST00000354513 SLC12A8A0AV02 714 aa16.61■□□□□ 0.25
PDGFA-201ENST00000354513 TRIM49BA6NDI0 452 aa16.61■□□□□ 0.25
PDGFA-201ENST00000354513 EPB41P11171 864 aaKnown RBP16.61■□□□□ 0.25
PDGFA-201ENST00000354513 MAOBP27338 520 aa16.61■□□□□ 0.25
PDGFA-201ENST00000354513 HOXD9P28356 352 aaPredicted RBP16.61■□□□□ 0.25
PDGFA-201ENST00000354513 CHKAP35790 457 aa16.61■□□□□ 0.25
PDGFA-201ENST00000354513 GFPT1Q06210 699 aaPredicted RBP16.61■□□□□ 0.25
PDGFA-201ENST00000354513 CUL2Q13617 745 aa16.61■□□□□ 0.25
PDGFA-201ENST00000354513 ZNF234Q14588 700 aa16.61■□□□□ 0.25
PDGFA-201ENST00000354513 PKDCCQ504Y2 493 aa16.61■□□□□ 0.25
PDGFA-201ENST00000354513 COBLL1Q53SF7 1204 aa16.61■□□□□ 0.25
PDGFA-201ENST00000354513 DCLK3Q9C098 648 aa16.61■□□□□ 0.25
PDGFA-201ENST00000354513 SCAND2PQ9GZW5 306 aaPredicted RBP16.61■□□□□ 0.25
PDGFA-201ENST00000354513 WSB2Q9NYS7 404 aaPredicted RBP16.61■□□□□ 0.25
PDGFA-201ENST00000354513 KLK13Q9UKR3 277 aa16.61■□□□□ 0.25
PDGFA-201ENST00000354513 XPO1O14980 1071 aaKnown RBP16.6■□□□□ 0.25
PDGFA-201ENST00000354513 CETN3O15182 167 aa16.6■□□□□ 0.25
PDGFA-201ENST00000354513 ZBED1O96006 694 aa16.6■□□□□ 0.25
PDGFA-201ENST00000354513 CD6P30203 668 aa16.6■□□□□ 0.25
PDGFA-201ENST00000354513 SGSHP51688 502 aa16.6■□□□□ 0.25
PDGFA-201ENST00000354513 BCAT1P54687 386 aa16.6■□□□□ 0.25
PDGFA-201ENST00000354513 BNC1Q01954 994 aa16.6■□□□□ 0.25
PDGFA-201ENST00000354513 ADIGQ0VDE8 80 aa16.6■□□□□ 0.25
PDGFA-201ENST00000354513 DCAF17Q5H9S7 520 aaPredicted RBP16.6■□□□□ 0.25
PDGFA-201ENST00000354513 ANKRD40Q6AI12 368 aa16.6■□□□□ 0.25
PDGFA-201ENST00000354513 ANKS1BQ7Z6G8 1248 aa16.6■□□□□ 0.25
PDGFA-201ENST00000354513 ARHGAP18Q8N392 663 aa16.6■□□□□ 0.25
PDGFA-201ENST00000354513 TTC39CQ8N584 583 aa16.6■□□□□ 0.25
PDGFA-201ENST00000354513 ERCC4Q92889 916 aaPredicted RBP16.6■□□□□ 0.25
PDGFA-201ENST00000354513 SLC35C1Q96A29 364 aa16.6■□□□□ 0.25
PDGFA-201ENST00000354513 PLD4Q96BZ4 506 aa16.6■□□□□ 0.25
PDGFA-201ENST00000354513 TOE1Q96GM8 510 aaKnown RBP16.6■□□□□ 0.25
PDGFA-201ENST00000354513 CAMK1GQ96NX5 476 aa16.6■□□□□ 0.25
PDGFA-201ENST00000354513 ZSWIM1Q9BR11 485 aa16.6■□□□□ 0.25
PDGFA-201ENST00000354513 FAM124BQ9H5Z6 455 aaPredicted RBP16.6■□□□□ 0.25
PDGFA-201ENST00000354513 PRDM16Q9HAZ2 1276 aa16.6■□□□□ 0.25
PDGFA-201ENST00000354513 ITM2CQ9NQX7 267 aa16.6■□□□□ 0.25
PDGFA-201ENST00000354513 YJEFN3A6XGL0 299 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 E7ENQ6 273 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 O00370 1275 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 SLC16A3O15427 465 aaKnown RBP16.59■□□□□ 0.25
PDGFA-201ENST00000354513 OPHN1O60890 802 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 IGLV3-19P01714 112 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 C7P10643 843 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 NCAM1P13591 858 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 SIM1P81133 766 aaPredicted RBP16.59■□□□□ 0.25
PDGFA-201ENST00000354513 GRIK2Q13002 908 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 ZNF658Q5TYW1 1059 aaPredicted RBP16.59■□□□□ 0.25
PDGFA-201ENST00000354513 FMNL3Q8IVF7 1028 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 ENGASEQ8NFI3 743 aa16.59■□□□□ 0.25
PDGFA-201ENST00000354513 SPATA20Q8TB22 786 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms