RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PSMB7Q99436 277 aa28.14■■■□□ 2.1
SSBP4-202ENST00000348495 ANLNQ9NQW6 1124 aa28.14■■■□□ 2.1
SSBP4-202ENST00000348495 C2orf16Q68DN1 1984 aa28.13■■■□□ 2.09
SSBP4-202ENST00000348495 I6L893 689 aaPredicted RBP28.13■■■□□ 2.09
SSBP4-202ENST00000348495 RWDD2BP57060 319 aa28.13■■■□□ 2.09
SSBP4-202ENST00000348495 SCAPQ12770 1279 aa28.13■■■□□ 2.09
SSBP4-202ENST00000348495 ERMARDQ5T6L9 678 aa28.13■■■□□ 2.09
SSBP4-202ENST00000348495 FCRL2Q96LA5 508 aaPredicted RBP28.13■■■□□ 2.09
SSBP4-202ENST00000348495 SNRNP25Q9BV90 132 aaKnown RBP28.13■■■□□ 2.09
SSBP4-202ENST00000348495 WDCPQ9H6R7 721 aa28.13■■■□□ 2.09
SSBP4-202ENST00000348495 RRAGDQ9NQL2 400 aaPredicted RBP28.13■■■□□ 2.09
SSBP4-202ENST00000348495 ARHGEF38Q9NXL2 777 aa28.13■■■□□ 2.09
SSBP4-202ENST00000348495 HBS1LQ9Y450 684 aaKnown RBP28.13■■■□□ 2.09
SSBP4-202ENST00000348495 SAR1BQ9Y6B6 198 aa28.13■■■□□ 2.09
SSBP4-202ENST00000348495 SOBPA7XYQ1 873 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 KCNK3O14649 394 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 GJC1P36383 396 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 KPNA1P52294 538 aaPredicted RBP28.12■■■□□ 2.09
SSBP4-202ENST00000348495 AIF1P55008 147 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 TBX4P57082 545 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 RING1Q06587 406 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 ZC3H12AQ5D1E8 599 aaKnown RBP28.12■■■□□ 2.09
SSBP4-202ENST00000348495 BRMS1LQ5PSV4 323 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 STXBP5Q5T5C0 1151 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 PSTKQ8IV42 348 aaKnown RBP28.12■■■□□ 2.09
SSBP4-202ENST00000348495 ACSF2Q96CM8 615 aaPredicted RBP28.12■■■□□ 2.09
SSBP4-202ENST00000348495 CYP2S1Q96SQ9 504 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 GAS2L1Q99501 681 aaPredicted RBP28.12■■■□□ 2.09
SSBP4-202ENST00000348495 NACA2Q9H009 215 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 CARD9Q9H257 536 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 TRPC7Q9HCX4 862 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 DDX56Q9NY93 547 aaKnown RBP28.12■■■□□ 2.09
SSBP4-202ENST00000348495 FZD10Q9ULW2 581 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 REV3LO60673 3130 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 SLC12A8A0AV02 714 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 KCNU1A8MYU2 1149 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 ZNF197O14709 1029 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 TBX10O75333 385 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 TCP1P17987 556 aaKnown RBP28.12■■■□□ 2.09
SSBP4-202ENST00000348495 DDX6P26196 483 aaKnown RBP eCLIP28.12■■■□□ 2.097e-7■■■□□ 19
SSBP4-202ENST00000348495 CCR1P32246 355 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 CXCR5P32302 372 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 ADRA1BP35368 520 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 TEAD2Q15562 447 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 ARL14EPQ8N8R7 260 aaPredicted RBP28.12■■■□□ 2.09
SSBP4-202ENST00000348495 KLF16Q9BXK1 252 aaPredicted RBP28.12■■■□□ 2.09
SSBP4-202ENST00000348495 SLC46A2Q9BY10 475 aa28.12■■■□□ 2.09
SSBP4-202ENST00000348495 SRGAP2O75044 1071 aa28.11■■■□□ 2.09
SSBP4-202ENST00000348495 HDCP19113 662 aa28.11■■■□□ 2.09
SSBP4-202ENST00000348495 LTBRP36941 435 aa28.11■■■□□ 2.09
SSBP4-202ENST00000348495 ARSEP51690 589 aa28.11■■■□□ 2.09
SSBP4-202ENST00000348495 DLX2Q07687 328 aaPredicted RBP28.11■■■□□ 2.09
SSBP4-202ENST00000348495 MAB21L3Q8N8X9 362 aa28.11■■■□□ 2.09
SSBP4-202ENST00000348495 EXD1Q8NHP7 514 aa28.11■■■□□ 2.09
SSBP4-202ENST00000348495 COG1Q8WTW3 980 aa28.11■■■□□ 2.09
SSBP4-202ENST00000348495 ZFRQ96KR1 1074 aaKnown RBP28.11■■■□□ 2.09
SSBP4-202ENST00000348495 TKTL2Q9H0I9 626 aa28.11■■■□□ 2.09
SSBP4-202ENST00000348495 TMPRSS4Q9NRS4 437 aa28.11■■■□□ 2.09
SSBP4-202ENST00000348495 SLTMQ9NWH9 1034 aaKnown RBP eCLIP28.11■■■□□ 2.091e-7■■■■□ 22.5
SSBP4-202ENST00000348495 SLC2A3P11169 496 aa28.1■■■□□ 2.09
SSBP4-202ENST00000348495 PYGMP11217 842 aa28.1■■■□□ 2.09
SSBP4-202ENST00000348495 SLC7A9P82251 487 aa28.1■■■□□ 2.09
SSBP4-202ENST00000348495 CA9Q16790 459 aa28.1■■■□□ 2.09
SSBP4-202ENST00000348495 FAM71BQ8TC56 605 aa28.1■■■□□ 2.09
SSBP4-202ENST00000348495 RAPGEF5Q92565 580 aa28.1■■■□□ 2.09
SSBP4-202ENST00000348495 HSPH1Q92598 858 aa28.1■■■□□ 2.09
SSBP4-202ENST00000348495 APOL5Q9BWW9 433 aa28.1■■■□□ 2.09
SSBP4-202ENST00000348495 S1PR5Q9H228 398 aa28.1■■■□□ 2.09
SSBP4-202ENST00000348495 ADAM7Q9H2U9 754 aa28.1■■■□□ 2.09
SSBP4-202ENST00000348495 STAU2Q9NUL3 570 aaKnown RBP eCLIP28.1■■■□□ 2.09
SSBP4-202ENST00000348495 KLHL11Q9NVR0 708 aa28.1■■■□□ 2.09
SSBP4-202ENST00000348495 GPATCH2LQ9NWQ4 482 aa28.1■■■□□ 2.09
SSBP4-202ENST00000348495 AP4E1Q9UPM8 1137 aa28.1■■■□□ 2.09
SSBP4-202ENST00000348495 CLUHO75153 1309 aa28.1■■■□□ 2.09
SSBP4-202ENST00000348495 C3orf70A6NLC5 250 aaPredicted RBP28.09■■■□□ 2.09
SSBP4-202ENST00000348495 CES2O00748 559 aa28.09■■■□□ 2.09
SSBP4-202ENST00000348495 COG7P83436 770 aa28.09■■■□□ 2.09
SSBP4-202ENST00000348495 DNTTIP2Q5QJE6 756 aaKnown RBP28.09■■■□□ 2.09
SSBP4-202ENST00000348495 GPR158Q5T848 1215 aa28.09■■■□□ 2.09
SSBP4-202ENST00000348495 RNF34Q969K3 372 aa28.09■■■□□ 2.09
SSBP4-202ENST00000348495 PABPC5Q96DU9 382 aaKnown RBP28.09■■■□□ 2.09
SSBP4-202ENST00000348495 PBKQ96KB5 322 aa28.09■■■□□ 2.09
SSBP4-202ENST00000348495 TASP1Q9H6P5 420 aa28.09■■■□□ 2.09
SSBP4-202ENST00000348495 CLDND1Q9NY35 253 aa28.09■■■□□ 2.09
SSBP4-202ENST00000348495 TRAV19A0A0A6YYK7 116 aa28.09■■■□□ 2.09
SSBP4-202ENST00000348495 ZRANB2O95218 330 aaKnown RBP eCLIP28.09■■■□□ 2.091e-6■■■■□ 22.3
SSBP4-202ENST00000348495 KRT1P04264 644 aa28.09■■■□□ 2.09
SSBP4-202ENST00000348495 DPYSL2Q16555 572 aa28.09■■■□□ 2.09
SSBP4-202ENST00000348495 ARL13BQ3SXY8 428 aa28.09■■■□□ 2.09
SSBP4-202ENST00000348495 ARHGAP15Q53QZ3 475 aa28.09■■■□□ 2.09
SSBP4-202ENST00000348495 RCOR2Q8IZ40 523 aa28.09■■■□□ 2.09
SSBP4-202ENST00000348495 ITFG1Q8TB96 612 aa28.09■■■□□ 2.09
SSBP4-202ENST00000348495 MAGEB5Q9BZ81 275 aa28.09■■■□□ 2.09
SSBP4-202ENST00000348495 MTMR10Q9NXD2 777 aa28.09■■■□□ 2.09
SSBP4-202ENST00000348495 MRPS23Q9Y3D9 190 aaKnown RBP28.09■■■□□ 2.09
SSBP4-202ENST00000348495 SZT2Q5T011 3432 aa28.08■■■□□ 2.09
SSBP4-202ENST00000348495 MBL2P11226 248 aaPredicted RBP28.08■■■□□ 2.09
SSBP4-202ENST00000348495 CEBPBP17676 345 aa28.08■■■□□ 2.09
SSBP4-202ENST00000348495 ITIH3Q06033 890 aa28.08■■■□□ 2.09
SSBP4-202ENST00000348495 ZNF211Q13398 564 aaPredicted RBP28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms