RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 MEIS3P2A8K0S8 358 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 C2CD2LO14523 706 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 PTGESO14684 152 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 DGKIO75912 1065 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 CBX6O95503 412 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 BGNP21810 368 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 NR2C2P49116 596 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 BMPR2Q13873 1038 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 MORN1Q5T089 497 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 WLSQ5T9L3 541 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 KIAA0319Q5VV43 1072 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 STRADAQ7RTN6 431 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 TTC17Q96AE7 1141 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 FAM149B1Q96BN6 582 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 SLC7A6OSQ96CW6 309 aaPredicted RBP15.97■□□□□ 0.15
UPF3B-202ENST00000345865 L3MBTL1Q9Y468 752 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 IQCA1LA6NCM1 817 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 TRDMT1O14717 391 aaKnown RBP15.97■□□□□ 0.15
UPF3B-202ENST00000345865 XPO1O14980 1071 aaKnown RBP15.97■□□□□ 0.15
UPF3B-202ENST00000345865 MFSD11O43934 449 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 RFPL1O75677 317 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 DCTN3O75935 186 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 ZFXP17010 805 aaPredicted RBP15.97■□□□□ 0.15
UPF3B-202ENST00000345865 TPSB2P20231 275 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 ACADSBP45954 432 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 MRPS5P82675 430 aaKnown RBP15.97■□□□□ 0.15
UPF3B-202ENST00000345865 TPSAB1Q15661 275 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 SLC25A52Q3SY17 297 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 PREPLQ4J6C6 727 aaPredicted RBP15.97■□□□□ 0.15
UPF3B-202ENST00000345865 DCAF6Q58WW2 860 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 DENND5BQ6ZUT9 1274 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 CHSY1Q86X52 802 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 UNC5BQ8IZJ1 945 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 AGAP11Q8TF27 550 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 OXNAD1Q96HP4 312 aaPredicted RBP15.97■□□□□ 0.15
UPF3B-202ENST00000345865 SRPK1Q96SB4 655 aaKnown RBP15.97■□□□□ 0.15
UPF3B-202ENST00000345865 EBNA1BP2Q99848 306 aaKnown RBP15.97■□□□□ 0.15
UPF3B-202ENST00000345865 ARHGEF4Q9NR80 690 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 ZNF180Q9UJW8 692 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 MAD1L1Q9Y6D9 718 aa15.97■□□□□ 0.15
UPF3B-202ENST00000345865 SYNJ2BP-COX16A0A087WUM0 186 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 HUS1O60921 280 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 SNRPAP09012 282 aaKnown RBP15.96■□□□□ 0.15
UPF3B-202ENST00000345865 IBSPP21815 317 aaPredicted RBP15.96■□□□□ 0.15
UPF3B-202ENST00000345865 ALDH3A1P30838 453 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 PNPLA4P41247 253 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 SULT1E1P49888 294 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 SEMA5AQ13591 1074 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 PRKD1Q15139 912 aaPredicted RBP15.96■□□□□ 0.15
UPF3B-202ENST00000345865 SV2CQ496J9 727 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 TAF1BQ53T94 588 aaPredicted RBP15.96■□□□□ 0.15
UPF3B-202ENST00000345865 SYPL2Q5VXT5 272 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 HEATR6Q6AI08 1181 aaKnown RBP15.96■□□□□ 0.15
UPF3B-202ENST00000345865 HFE2Q6ZVN8 426 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 MTDHQ86UE4 582 aaKnown RBP15.96■□□□□ 0.15
UPF3B-202ENST00000345865 TP53INP2Q8IXH6 220 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 RNF169Q8NCN4 708 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 LRRC39Q96DD0 335 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 HNRNPABQ99729 332 aaKnown RBP15.96■□□□□ 0.15
UPF3B-202ENST00000345865 TSSK1BQ9BXA7 367 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 DUSP16Q9BY84 665 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 KCNK13Q9HB14 408 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 TXLNGQ9NUQ3 528 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 COX16Q9P0S2 106 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 MYL3P08590 195 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 AFF1P51825 1210 aaKnown RBP15.96■□□□□ 0.15
UPF3B-202ENST00000345865 MAP2K5Q13163 448 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 CTC1Q2NKJ3 1217 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 EFHC1Q5JVL4 640 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 ANKRD20A2Q5SQ80 823 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 ANKRD20A1Q5TYW2 823 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 ANKRD20A3Q5VUR7 823 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 CES4AQ5XG92 561 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 WSCD1Q658N2 575 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 ZNF449Q6P9G9 518 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 BNIPLQ7Z465 357 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 HTR3CQ8WXA8 447 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 NT5C3BQ969T7 300 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 MECRQ9BV79 373 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 CEP41Q9BYV8 373 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 LRMDAQ9H2I8 198 aa15.96■□□□□ 0.15
UPF3B-202ENST00000345865 PIH1D1Q9NWS0 290 aaKnown RBP15.96■□□□□ 0.15
UPF3B-202ENST00000345865 TSC2P49815 1807 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 ZNF236Q9UL36 1845 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 FAM159BA6NKW6 160 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 WARSP23381 471 aaKnown RBP15.95■□□□□ 0.14
UPF3B-202ENST00000345865 SERPINB4P48594 390 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 CRADDP78560 199 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 NBPF20Q3BBV1 942 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 FYB2Q5VWT5 728 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 GSDMBQ8TAX9 411 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 TFB1MQ8WVM0 346 aaKnown RBP15.95■□□□□ 0.14
UPF3B-202ENST00000345865 TNIP3Q96KP6 325 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.95■□□□□ 0.14
UPF3B-202ENST00000345865 A0A0G2JND7 137 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 COPEO14579 308 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 KRT37O76014 449 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 TOP3BO95985 862 aaKnown RBP15.95■□□□□ 0.14
UPF3B-202ENST00000345865 AMHP03971 560 aa15.95■□□□□ 0.14
UPF3B-202ENST00000345865 PTPN1P18031 435 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms